Pairwise Alignments

Query, 690 a.a., ATP-dependent helicase DinG (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 636 a.a., putative ATP-dependent helicase, DinG family from Escherichia coli BL21

 Score =  214 bits (544), Expect = 1e-59
 Identities = 185/684 (27%), Positives = 308/684 (45%), Gaps = 88/684 (12%)

Query: 17  IAASLPNFRPRREQNFMVAEISKTLAGDYDKDRRIIVVEAGTGIGKSLSYILGTIPLALA 76
           +A ++P F+PR  Q  M   +++ +     +  + +VVEAGTG GK+ +Y+      AL 
Sbjct: 11  LAKAIPGFKPREPQRQMAVAVTQAI-----EKGQPLVVEAGTGTGKTYAYLAP----ALR 61

Query: 77  SKKKVCIATATVALQEQLLHKDLPFFLEQSGLNFRFGLVKGRQRYVCLSKLAM--LIGDD 134
           +KKKV I+T + ALQ+QL  +DLP   +         L+KGR  Y+CL +L    L G D
Sbjct: 62  AKKKVIISTGSKALQDQLYSRDLPTVSKALKYTGNVALLKGRSNYLCLERLEQQALAGGD 121

Query: 135 NSTQMAMWQTKPDNSQIAMLQTLLNDVNEGRWNGEIDTLSTPIPD-HLWQQIACDKHSC- 192
              Q+         S + +L++  N   +G    +I T  +   D   W  +     +C 
Sbjct: 122 LPVQIL--------SDVILLRSWSNQTVDG----DISTCVSVAEDSQAWPLVTSTNDNCL 169

Query: 193 HRQLASHRNCPFHKAREDVDTWDVLIANHSLLFADL---ELGGGVILPNPEDVFYVIDEA 249
                 +++C   KAR+     DV++ NH L  AD+   E G G ++P  + + +  DEA
Sbjct: 170 GSDCPMYKDCFVVKARKKAMDADVVVVNHHLFLADMVVKESGFGELIPEADVMIF--DEA 227

Query: 250 HHLPIVARDFSSAQATLRGAADWLEKVG---KTSAKLQNQIK--SNNIIAPAQAMQDHIG 304
           H LP +A  +     + R   D  + +    +T  K   Q++  ++ +   AQ  +  +G
Sbjct: 228 HQLPDIASQYFGQSLSSRQLLDLAKDITIAYRTELKDTQQLQKCADRLAQSAQDFRLQLG 287

Query: 305 DLIGQLNQVAHYCDTQTKQFANPESRYRFEHGKLPGALKIPAENLAATSNLALKQFNKMQ 364
           +          Y     +  ANP+         +  A  +  + L    ++A     +  
Sbjct: 288 E--------PGYRGNLRELLANPQ---------IQRAFLLLDDTLELCYDVAKLSLGRSA 330

Query: 365 LLLAEAIKDGDIPKHQAEALQAEMGFMLQRLENLQKLWKMMAKEDSNKGAPMARWIELIT 424
           LL               +A          RL+ L        KE +  G   + W E  +
Sbjct: 331 LL---------------DAAFERATLYRTRLKRL--------KEINQPG--YSYWYECTS 365

Query: 425 GKQVDYLFSASPIEVGFMLETMLWQKAAGVVLCSATLRALNNFDHFAHQVGLSLKDGSRY 484
                +  + +P+ V    + ++ QK    +  SATL   ++  HF  ++G+   +    
Sbjct: 366 RH---FTLALTPLSVADKFKELMAQKPGSWIFTSATLSVNDDLHHFTSRLGIEQAES--- 419

Query: 485 LALQSPFDYPNNATLYLPKMKTEPTDDAYTAELAEQILQLIEGEMAT-LVLFASYWQMEK 543
           L L SPFDY   A L +P+   +        +LA  +  +IE       +L  S+  M  
Sbjct: 420 LLLPSPFDYSRQALLCVPRNLPQTNQPGSARQLAAMLRPIIEANNGRCFMLCTSHAMMRD 479

Query: 544 VAELLEGKLALEILIQGNAPRQQLLETHKAKCDKGEPSILFGTGSFSEGLDLPGDYLTNL 603
           +AE     + L +L+QG   + QLL+   +  +    ++L  T SF EG+D+ GD L+ +
Sbjct: 480 LAEQFRATMTLPVLLQGETSKGQLLQQFVSAGN----ALLVATSSFWEGVDVRGDTLSLV 535

Query: 604 IVTKLPFAVPTSPVEQAHAEYVKIKGGNPFLQLTIPDASRKLIQSCGRLLRKEQDYGRVT 663
           I+ KLPF  P  P+ +A  E  +++GG+PF ++ +PDA   L Q  GRL+R   D G + 
Sbjct: 536 IIDKLPFTSPDDPLLKARMEDCRLRGGDPFDEVQLPDAVITLKQGVGRLIRDADDRGVLV 595

Query: 664 ILDRRLVTKRYGKSLLDALPPFRR 687
           I D RLV + YG + L +LPP  R
Sbjct: 596 ICDNRLVMRPYGATFLASLPPAPR 619