Pairwise Alignments

Query, 690 a.a., ATP-dependent helicase DinG (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 716 a.a., ATP-dependent DNA helicase from Escherichia coli BL21

 Score =  350 bits (898), Expect = e-100
 Identities = 239/701 (34%), Positives = 372/701 (53%), Gaps = 38/701 (5%)

Query: 6   VKNQIRAIYKDIAASLPNFRPRREQNFMVAEISKTLAGDYDKDRRIIVVEAGTGIGKSLS 65
           +K QI A YK +   +P+F PR  Q  M+A+++KTLAG+   + R + +EA TG+GK+LS
Sbjct: 7   LKAQIAAWYKALQEQIPDFIPRAPQRQMIADVAKTLAGE---EGRHLAIEAPTGVGKTLS 63

Query: 66  YILGTIPLALASKKKVCIATATVALQEQLLHKDLPFFLEQSGLNFRFGLVKGRQRYVCLS 125
           Y++  I +A   +K + ++TA VALQ+Q+  KDLP  L++   + +F    GR RYVC  
Sbjct: 64  YLIPGIAIAREEQKTLVVSTANVALQDQIYSKDLPL-LKKIIPDLKFTAAFGRGRYVCPR 122

Query: 126 KLAMLIGDDNSTQMAMW----QTKPDNSQIAM-LQTLLNDVNEGRWNGEIDTLSTPIPDH 180
            L  L   + + Q  +     +  P+N +       L  D++  +W+G  D     I D 
Sbjct: 123 NLTALASTEPTQQDLLAFLDDELTPNNQEEQKRCAKLKGDLDTYKWDGLRDHTDIAIDDD 182

Query: 181 LWQQIACDKHSC-HRQLASHRNCPFHKAREDVDTWDVLIANHSLLFADLELGGGVILPNP 239
           LW++++ DK SC +R    +R CPF  AR ++   +V++ANH+L+ A +E     +LP+P
Sbjct: 183 LWRRLSTDKASCLNRNCYYYRECPFFVARREIQEAEVVVANHALVMAAME--SEAVLPDP 240

Query: 240 EDVFYVIDEAHHLPIVARDFSSAQATLRGAADW----LEKVGKTSAKLQNQIKSNNI--I 293
           +++  V+DE HHLP VARD     A +   A W    L+   K  A    Q +   I  +
Sbjct: 241 KNLLLVLDEGHHLPDVARDALEMSAEI--TAPWYRLQLDLFTKLVATCMEQFRPKTIPPL 298

Query: 294 APAQAMQDH---IGDLIGQLNQVAHYCDTQTKQFANPESRYRFEHGKLPGALKIPAENLA 350
           A  + +  H   + +LI  LN + +         A  E+ +RF  G+LP  +    + LA
Sbjct: 299 AIPERLNAHCEELYELIASLNNILNLYMP-----AGQEAEHRFAMGELPDEVLEICQRLA 353

Query: 351 ATSNLALKQFNKMQLLLAEAIKDGDIPKHQAEALQAEMGFMLQRLENLQKLWKMMAKEDS 410
             + +           L+E     DI +     LQ  M   L   E   KLW++ +   S
Sbjct: 354 KLTEMLRGLAELFLNDLSEKTGSHDIVRLHRLILQ--MNRALGMFEAQSKLWRLASLAQS 411

Query: 411 NKGAPMARWIELITGK-QVDYLFSASPIEVGFMLETMLWQKAAGVVLCSATLRALNNFDH 469
           + GAP+ +W      + Q+   F    I V   LE +LW+    +++ SATLR+LN+F  
Sbjct: 412 S-GAPVTKWATREEREGQLHLWFHCVGIRVSDQLERLLWRSIPHIIVTSATLRSLNSFSR 470

Query: 470 FAHQVGLSLKDGSRYLALQSPFDYPNNATLYLPKMKTEPT---DDAYTAELAEQILQLIE 526
                GL  K G R++AL SPF++     + +P+M+ EP+   ++ + AE+A    + +E
Sbjct: 471 LQEMSGLKEKAGDRFVALDSPFNHCEQGKIVIPRMRVEPSIDNEEQHIAEMAAFFRKQVE 530

Query: 527 GE--MATLVLFASYWQMEKVAELLEGKLALEILIQGNAPRQQLLETHKAKCDKGEPSILF 584
            +  +  LVLFAS   M++  + +   L L +L+QG+ PR +L+E H+ +   GE S+L 
Sbjct: 531 SKKHLGMLVLFASGRAMQRFLDYVTD-LRLMLLVQGDQPRYRLVELHRKRVANGERSVLV 589

Query: 585 GTGSFSEGLDLPGDYLTNLIVTKLPFAVPTSPVEQAHAEYVKIKGGNPFLQLTIPDASRK 644
           G  SF+EGLDL GD L+ + + K+ F    SPV     E++K     PF   ++P AS  
Sbjct: 590 GLQSFAEGLDLKGDLLSQVHIHKIAFPPIDSPVVITEGEWLKSLNRYPFEVQSLPSASFN 649

Query: 645 LIQSCGRLLRKEQDYGRVTILDRRLVTKRYGKSLLDALPPF 685
           LIQ  GRL+R    +G V I D+RL+TK YGK LLDALP F
Sbjct: 650 LIQQVGRLIRSHGCWGEVVIYDKRLLTKNYGKRLLDALPVF 690