Pairwise Alignments

Query, 452 a.a., permease, GntP family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 454 a.a., predicted transporter (NCBI) from Escherichia coli BW25113

 Score =  208 bits (530), Expect = 3e-58
 Identities = 138/454 (30%), Positives = 235/454 (51%), Gaps = 11/454 (2%)

Query: 3   LVLILIGVIAFIVIATSKFKLHPFLTLILAAFIAAFAYGLPSGDIAKTITTGFGNILGYI 62
           L + L GVI  +++   K K+ PF+ L+L + + A A G+P+G++ K +  G G +LG +
Sbjct: 7   LCIALAGVIMLLLLVI-KAKVQPFVALLLVSLLVALAAGIPAGEVGKVMIAGMGGVLGSV 65

Query: 63  GLVIVLGTIIGIILEKSGAAITMADVVIKVLGKRFPTLTMSIIGYIVSIPVFCDSGFVIL 122
            ++I LG ++G ++E SG A ++A+   + LG +     +++  + + IPVF D GF+IL
Sbjct: 66  TIIIGLGAMLGRMIEHSGGAESLANYFSRKLGDKRTIAALTLAAFFLGIPVFFDVGFIIL 125

Query: 123 NSLKQSMANRMQVSSVSMSVALATGLYATHTFVPPTPGPIAAAGNLGLESNLGLVIGVGL 182
             +    A   ++S +   + +A  +   H  VPP PGP+AAAG L  +     +IG+ +
Sbjct: 126 APIIYGFAKVAKISPLKFGLPVAGIMLTVHVAVPPHPGPVAAAGLLHADIGWLTIIGIAI 185

Query: 183 F--VAAVASFAGMLWANRFAGVEPDGEGAEELKAQANDFESLKQSYGTLPSPLKAFAPIF 240
              V  V  FA  +   R   +  +     +L   + +  +        P      + I 
Sbjct: 186 SIPVGVVGYFAAKIINKRQYAMSVEVLEQMQLAPASEEGATKLSDKINPPGVALVTSLIV 245

Query: 241 VPILLICLGSVANFPSAPFGKEGLFSLLVFLGQPVNALLIGLFLS--ALLLKSTNKIAEF 298
           +PI +I  G+V+     P     L   L  +G P+ AL+I L L+   L L+    +   
Sbjct: 246 IPIAIIMAGTVSATLMPP--SHPLLGTLQLIGSPMVALMIALVLAFWLLALRRGWSLQHT 303

Query: 299 SERISQGLVAAAPIILITGAGGAFGAVLKATPIGDFLGSSLSALGVGIF-MPFIVAAALK 357
           S+ +   L  AA +IL+TGAGG FG VL  + +G  L + L  + + +    FI++ AL+
Sbjct: 304 SDIMGSALPTAAVVILVTGAGGVFGKVLVESGVGKALANMLQMIDLPLLPAAFIISLALR 363

Query: 358 SAQGSSTVALVATSALVAPMLGDIGLGSEMGRVLTVMAIGAGAMTVSHANDSFFWVVTQF 417
           ++QGS+TVA++ T  L++  +  +GL + +  VL  +A   G +  SH NDS FW+VT++
Sbjct: 364 ASQGSATVAILTTGGLLSEAV--MGL-NPIQCVLVTLAACFGGLGASHINDSGFWIVTKY 420

Query: 418 SRMSVTQAYKAQTMATLIQGVTSMLAVYVLSLVL 451
             +SV    K  T+ T I G T  L  + +  V+
Sbjct: 421 LGLSVADGLKTWTVLTTILGFTGFLITWCVWAVI 454