Pairwise Alignments

Query, 452 a.a., permease, GntP family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 445 a.a., predicted transporter (NCBI) from Escherichia coli BW25113

 Score =  214 bits (546), Expect = 3e-60
 Identities = 148/453 (32%), Positives = 238/453 (52%), Gaps = 18/453 (3%)

Query: 3   LVLILIGVIAFIVIATSKFKLHPFLTLILAAFIAAFAYGLPSGDIAKTITTGFGNILGYI 62
           +V  L+  I  IV+   KFK HPFL L+LA+F      G+   D+   I +G G  LG++
Sbjct: 7   VVSTLLISIVLIVLTIVKFKFHPFLALLLASFFVGTMMGMGPLDMVNAIESGIGGTLGFL 66

Query: 63  GLVIVLGTIIGIILEKSGAAITMADVVIKVLGKRFPTLTMSIIGYIVSIPVFCDSGFVIL 122
             VI LGTI+G ++E SGAA  +  + ++        + M ++G I  I +F + G V+L
Sbjct: 67  AAVIGLGTILGKMMEVSGAAERIG-LTLQRCRWLSVDVIMVLVGLICGITLFVEVGVVLL 125

Query: 123 NSLKQSMANRMQVSSVSMSVALATGLYATHTFVPPTPGPIAAAGNLGLESNLGLVIGVGL 182
             L  S+A +   S + +++ L T L A H  VPP P  +  A  LG  +++G VI  GL
Sbjct: 126 IPLAFSIAKKTNTSLLKLAIPLCTALMAVHCVVPPHPAALYVANKLG--ADIGSVIVYGL 183

Query: 183 FVAAVASFAGMLWANRFAGVEPDGEGAEELKAQANDFESLK-QSYGTLPSPLKAFAPIFV 241
            V  +AS  G     +F G           K    +F  LK +   TLPS       I +
Sbjct: 184 LVGLMASLIGGPLFLKFLGQR------LPFKPVPTEFADLKVRDEKTLPSLGATLFTILL 237

Query: 242 PILLICLGSVANFPSAPFGKEGLFSLLVFLGQPVNALLIGLFLS--ALLLKSTNKIAEFS 299
           PI L+ + ++A    A   + GL+ L+ F+G P+ A+ I +F++   L ++    +    
Sbjct: 238 PIALMLVKTIAELNMA--RESGLYILVEFIGNPITAMFIAVFVAYYVLGIRQHMSMGTML 295

Query: 300 ERISQGLVAAAPIILITGAGGAFGAVLKATPIGDFLGSSLSALGV-GIFMPFIVAAALKS 358
                G  + A I+LI GAGGAF A+LK++ + D L   LS + +  I + ++VA  L +
Sbjct: 296 THTENGFGSIANILLIIGAGGAFNAILKSSSLADTLAVILSNMHMHPILLAWLVALILHA 355

Query: 359 AQGSSTVALVATSALVAPMLGDIGLGSEMGRVLTVMAIGAGAMTVSHANDSFFWVVTQFS 418
           A GS+TVA++  +A+VAPML    L  ++   +  +AIG+GA+  +   DS FW+V Q+ 
Sbjct: 356 AVGSATVAMMGATAIVAPML---PLYPDISPEIIAIAIGSGAIGCTIVTDSLFWLVKQYC 412

Query: 419 RMSVTQAYKAQTMATLIQGVTSMLAVYVLSLVL 451
             ++ + +K  T AT I  V ++   ++LS ++
Sbjct: 413 GATLNETFKYYTTATFIASVVALAGTFLLSFII 445