Pairwise Alignments

Query, 292 a.a., ABC transporter, ATP-binding protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 308 a.a., ABC-type multidrug transport system, ATPase component from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  134 bits (337), Expect = 3e-36
 Identities = 82/227 (36%), Positives = 132/227 (58%), Gaps = 9/227 (3%)

Query: 2   LTITDLTKTYDNGVRALDGVNLTISKGMF-GLLGPNGAGKSSLMRTIAALQSADSGSIVF 60
           L +  L KTY  GV+AL G++L +  G F  LLGPNGAGKS+ +  I++L +  SG +  
Sbjct: 5   LELQQLKKTYPGGVQALRGIDLQVEAGDFYALLGPNGAGKSTTIGIISSLVNKTSGRVNV 64

Query: 61  DGIDVLADPQSLRKTLGYLPQDFNVYPRISAYDLLDHLAVLKGINQSKQRKEIV---EGL 117
            G D+  D  + ++ LG +PQ+FN  P  +   ++ + A   G+    + KE V   E  
Sbjct: 65  FGYDLEKDVVNAKRQLGLVPQEFNFNPFETVQQIVVNQAGYYGV----EHKEAVLRSEKY 120

Query: 118 LAHTNLYQHKSKAVSGFSGGMRQRFGIAQALLGDPKLLIVDEPTAGLDPEERNRFHNLLV 177
           L   +L++ + +     SGGM++R  IA+AL+ +PKLLI+DEPTAG+D E R      L 
Sbjct: 121 LKQLDLWEKRHERARMLSGGMKRRLMIARALMHEPKLLILDEPTAGVDIELRRSMWGFLK 180

Query: 178 SLGEE-KVVILSTHIVEDVSELCANMAVLASGKILLQGNPQQLVSEL 223
            L  +   +IL+TH +E+   LC N+ ++  G+++   + + L+S+L
Sbjct: 181 DLNAKGTTIILTTHYLEEAEMLCRNIGIIQHGELVENTSMKNLLSKL 227