Pairwise Alignments

Query, 292 a.a., ABC transporter, ATP-binding protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 308 a.a., putative ABC transporter ATPase from Escherichia coli BL21

 Score =  133 bits (335), Expect = 4e-36
 Identities = 81/227 (35%), Positives = 133/227 (58%), Gaps = 9/227 (3%)

Query: 2   LTITDLTKTYDNGVRALDGVNLTISKGMF-GLLGPNGAGKSSLMRTIAALQSADSGSIVF 60
           L +  L KTY  GV+AL G++L +  G F  LLGPNGAGKS+ +  I++L +  SG +  
Sbjct: 5   LELQQLKKTYPGGVQALRGIDLQVEAGDFYALLGPNGAGKSTTIGIISSLVNKTSGRVSV 64

Query: 61  DGIDVLADPQSLRKTLGYLPQDFNVYPRISAYDLLDHLAVLKGINQSKQRKEIV---EGL 117
            G D+  D  + ++ LG +PQ+FN  P  +   ++ + A   G+    +RKE     E  
Sbjct: 65  FGYDLEKDVVNAKRQLGLVPQEFNFNPFETVQQIVVNQAGYYGV----ERKEAYIRSEKY 120

Query: 118 LAHTNLYQHKSKAVSGFSGGMRQRFGIAQALLGDPKLLIVDEPTAGLDPEERNRFHNLLV 177
           L   +L+  +++     SGGM++R  IA+AL+ +PKLLI+DEPTAG+D E R      L 
Sbjct: 121 LKQLDLWGKRNERARMLSGGMKRRLMIARALMHEPKLLILDEPTAGVDIELRRSMWGFLK 180

Query: 178 SLGEE-KVVILSTHIVEDVSELCANMAVLASGKILLQGNPQQLVSEL 223
            L ++   +IL+TH +E+   LC N+ ++  G+++   + + L+++L
Sbjct: 181 DLNDKGTTIILTTHYLEEAEMLCRNIGIIQHGELVENTSMKALLAKL 227