Pairwise Alignments

Query, 217 a.a., DedA family protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 219 a.a., general envelope maintenance protein; DedA family inner membrane protein; putative multidrug efflux transporter from Escherichia coli BL21

 Score =  147 bits (370), Expect = 2e-40
 Identities = 71/215 (33%), Positives = 130/215 (60%), Gaps = 1/215 (0%)

Query: 1   MDQLYQLAQAMIHNDLAVLSNPNVTLMVSGVILCFLVMENGFIPTAFLPGDTLLILTGVL 60
           M  +  +  A+  +D A L++P++  +V  V+   L +ENG +P +FLPGD+LLIL G L
Sbjct: 1   MAVIQDIIAALWQHDFAALADPHIVSVVYFVMFATLFLENGLLPASFLPGDSLLILAGAL 60

Query: 61  IYQDVLH-MGIVPLLMVATFIGTAIGYLQGYFLGHTQMYHRLLSHIDDKHQKKALYLIDK 119
           I Q V+  +  + +L  A  +G  + Y+QG +LG+T+     L+ +  K+ ++A  + D+
Sbjct: 61  IAQGVMDFLPTIAILTAAASLGCWLSYIQGRWLGNTKTVKGWLAQLPAKYHQRATCMFDR 120

Query: 120 YGILTLLVARYIPFVRTIYPYIIGATGVSWSRFLVINFISSVMWITPLVGFGYVISHSKL 179
           +G+L LL  R++ FVRT+ P + G +G+   RF   N++S ++W++ +  FGY +S    
Sbjct: 121 HGLLALLAGRFLAFVRTLLPTMAGISGLPNRRFQFFNWLSGLLWVSVVTSFGYALSMIPF 180

Query: 180 ANEYQTQFMSIIVYLPIVLLVSGIVTLIYKWLRKK 214
              ++ Q M+ ++ LPI LL +G++  ++  ++KK
Sbjct: 181 VKRHEDQVMTFLMILPIALLTAGLLGTLFVVIKKK 215