Pairwise Alignments

Query, 217 a.a., DedA family protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 219 a.a., DedA family inner membrane protein from Escherichia coli BL21

 Score = 90.5 bits (223), Expect = 2e-23
 Identities = 59/219 (26%), Positives = 109/219 (49%), Gaps = 23/219 (10%)

Query: 1   MDQLYQLAQAMIHNDLAVLSN-PNVTLMVSGVILCFLVMENGFIPTAFLPGDTLLILTGV 59
           MD +Y L   ++H D+ +        + V  ++   L  E G + T FLPGD+LL + G 
Sbjct: 1   MDLIYFLIDFILHIDVHLAELVAEYGVWVYAILFLILFCETGLVVTPFLPGDSLLFVAGA 60

Query: 60  LIYQDV----LHMGIVPLLMVATFIGTAIGYLQGYFLG-------HTQMYHRLLSHIDDK 108
           L   +     +HM +V L+++A  +G A+ Y  G   G       +++++ R  S++D  
Sbjct: 61  LASLETNDLNVHMMVV-LMLIAAIVGDAVNYTIGRLFGEKLFSNPNSKIFRR--SYLDKT 117

Query: 109 HQKKALYLIDKYGILTLLVARYIPFVRTIYPYIIGATGVSWSRFLVINFISSVMWITPLV 168
           HQ       +K+G  T+++AR++P VRT  P++ G   +S+  F   N I +++W+    
Sbjct: 118 HQ-----FYEKHGGKTIILARFVPIVRTFAPFVAGMGHMSYRHFAAYNVIGALLWVLLFT 172

Query: 169 GFGYVISHSKLANEYQTQFMSIIVYLPIVLLVSGIVTLI 207
             GY      +    Q     +IV + +V ++ G++ +I
Sbjct: 173 YAGYFFGTIPMV---QDNLKLLIVGIIVVSILPGVIEII 208