Pairwise Alignments

Query, 396 a.a., 3-ketoacyl-CoA thiolase [isoleucine degradation] (EC 2.3.1.16) (from data) from Shewanella oneidensis MR-1

Subject, 394 a.a., 3-ketoacyl-CoA thiolase (EC 2.3.1.16) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  469 bits (1207), Expect = e-137
 Identities = 243/388 (62%), Positives = 289/388 (74%), Gaps = 1/388 (0%)

Query: 10  IVIVAAKRTPMGSFQGSLSGITSLSLAATAIKALLADTQVAPDKVDEVLMGCVLPAGLGQ 69
           IVIV A RTPMG+FQ   + +++  L   AI+A +    V P +VDEVL G  L AG GQ
Sbjct: 6   IVIVGAARTPMGAFQSDFASLSAHDLGGAAIQAAVQRAGVDPAQVDEVLFGNCLMAGQGQ 65

Query: 70  APARQATLGAGLPLSVGATTVNKVCGSGMKTVMLAHDLIKAGSAKVVIAGGMESMSQAPY 129
           APARQA    GLP S GA T++K+CGSGMK  MLAHD++ AGSAKV++AGGMESM+ APY
Sbjct: 66  APARQAAFKGGLPKSAGAVTLSKMCGSGMKATMLAHDMLAAGSAKVMVAGGMESMTNAPY 125

Query: 130 LLDKARAGIRMGHGKVLDHMFLDGLEDAYTGG-AMGTFAQKTADEFGITREQMDAFALSS 188
           LL K R G RMGH KV DHM LDGLEDAY  G +MGTF +  A ++  TREQ DAFA++S
Sbjct: 126 LLQKGRGGYRMGHDKVYDHMMLDGLEDAYEPGRSMGTFGEDCAAKYSFTREQQDAFAIAS 185

Query: 189 LEKANAAINSGAFKTEIVPVTVSDRRGDVTIDTDEQPGNARPEKIPTLRPAFAKDGTITA 248
           + +A AA +SGAF  EI PVTV DR G+  +  DE PG  + +KIP L+PAF KDGTITA
Sbjct: 186 VTRAKAATDSGAFAAEITPVTVKDRSGERVVSIDEGPGKVKLDKIPALKPAFKKDGTITA 245

Query: 249 ANSSSISDGAAALMLTTRANAEQLGLTVLATIKGHTTHAQEPALFTTAPVGAMAKLLSNV 308
           A+SSSI+DGAAAL+L   + A+QLG   LA I GH THAQEP  F TAPVGA  KLL   
Sbjct: 246 ASSSSINDGAAALVLMRESTAKQLGAKPLARIVGHATHAQEPNWFATAPVGATQKLLEKT 305

Query: 309 GWSKDEVDLFEINEAFAMVTMLAVSELGLDMTKVNVNGGACALGHPIGCSGARLLVTLIH 368
           GW   +VDL+EINEAFA+V M  ++EL +   KVNVNGGACALGHPIG SGAR+LVTL+H
Sbjct: 306 GWQVGDVDLWEINEAFAVVPMALMTELKIPHEKVNVNGGACALGHPIGASGARILVTLLH 365

Query: 369 ALKARGLKRGVASLCIGGGEATAMAIEV 396
           ALKARG K+GVA+LCIGGGEATAMAIE+
Sbjct: 366 ALKARGGKKGVATLCIGGGEATAMAIEL 393