Pairwise Alignments

Query, 247 a.a., short chain dehydrogenase family protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 260 a.a., Oxidoreductase, short chain dehydrogenase/reductase family from Pseudomonas putida KT2440

 Score = 79.3 bits (194), Expect = 7e-20
 Identities = 70/243 (28%), Positives = 119/243 (48%), Gaps = 19/243 (7%)

Query: 6   AIIVGASSHLSRELAKQLADQQVELALFAQDVESLREFASTLPTKVQVFSL----QIEQP 61
           A+I GASS L   LA+ LA +   L L A+  E+L   A  L  +  V  L     + QP
Sbjct: 5   AMITGASSGLGLALAEALARRGRNLILVARQRETLEPVAIELTQRFGVEVLFRACDLSQP 64

Query: 62  ---SAIIEQLENVWQSLGGAHLVLVN-TGLNSYDPELP--WLPEQDIIDVNVRGFAAICN 115
              S  + +LE   + +     +LVN  GL +Y P L   W  EQD+++VNV   + +C+
Sbjct: 65  LRLSGFVLELEEGERRID----LLVNCAGLRTYGPFLAHEWADEQDLLEVNVLALSRLCH 120

Query: 116 TAFRLFREQGYGQLAAINSIAGLRGGP-SVAYHASKAFAQNYLEGLSMHAQRLKLPITIT 174
               L   QG GQ+  +  +AG+  GP   AY ASKA+  ++ + L    +R  + +++ 
Sbjct: 121 AIGNLMAVQGGGQILNVAGLAGVAPGPWMAAYAASKAYVLSFSQALREELKRTGIKVSVL 180

Query: 175 ---DIQLGLLDKAAMQQSTLWLAPLPQVAAQIIKAMQQGKRRVYVTKRWRLVAWLTKLLP 231
               ++      A +      L+P  +VA   ++A+ + +  +   +R R +A+  +LLP
Sbjct: 181 CPGPVRSARRRIARLDGKPRCLSP-EEVALYTVRALDKNRALIMPGRRNRWLAFAPRLLP 239

Query: 232 EFI 234
            ++
Sbjct: 240 RWL 242