Pairwise Alignments

Query, 247 a.a., short chain dehydrogenase family protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 302 a.a., SDR family NAD(P)-dependent oxidoreductase from Paraburkholderia sabiae LMG 24235

 Score = 65.1 bits (157), Expect = 2e-15
 Identities = 62/261 (23%), Positives = 107/261 (40%), Gaps = 35/261 (13%)

Query: 6   AIIVGASSHLSRELAKQLADQQVELALFAQDVESLREFAST----------LPTKVQVFS 55
           A I GA+S + R LA QLA +   LAL  ++  SL E A             P ++    
Sbjct: 9   AAITGAASGMGRSLAIQLAREGCHLALADRNAASLAETAQLAQAAAPPRIGAPMRITTCV 68

Query: 56  LQIEQPSAIIEQLENVWQSLGGAHLVLVNTG--LNSYDPELPWLPEQDIIDVNVRGFAAI 113
           L +   +A+ +   +  +  G A+LV  N G  L+S    + +   + I+ VN  G    
Sbjct: 69  LDVADRNAMYDWAADTARQHGRANLVFNNAGVALSSTIDGMDYADLEWIVGVNFWGVVHG 128

Query: 114 CNTAFRLFREQGYGQLAAINSIAGLRGGPSVA-YHASKAFAQNYLEGLSMHAQRLKLPIT 172
                 L +  G G +   +S+ GL   P ++ Y+A+K   + + E L      +K  ++
Sbjct: 129 TKAFLPLLKSAGEGHIVNTSSVFGLFAQPGMSGYNATKFAVRGFTEALRQELDLMKCGVS 188

Query: 173 ITDIQLGLLDKAAMQQSTL----------------------WLAPLPQVAAQIIKAMQQG 210
            T +  G +  A  Q S +                      ++    + A  I+  +++ 
Sbjct: 189 ATCVHPGGIRTAIAQSSRIAPNMVGFMIENEQQGKDDFEKFFITTADEAARTILDGVRRN 248

Query: 211 KRRVYVTKRWRLVAWLTKLLP 231
           KRRV + +  R   WL + LP
Sbjct: 249 KRRVLIGRDARAADWLARTLP 269