Pairwise Alignments

Query, 826 a.a., bacterial surface antigen (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 811 a.a., Outer membrane protein assembly factor YaeT from Variovorax sp. SCN45

 Score =  478 bits (1231), Expect = e-139
 Identities = 290/842 (34%), Positives = 451/842 (53%), Gaps = 72/842 (8%)

Query: 3   LNKLFA-----SMLFVGASFSGTVLADTFQPFEVTDIQVEGLQRVALGAALLSLPVKVGD 57
           +NK F+     S++ V AS      A   +PF V DI+VEGLQRV  G    SLP++VGD
Sbjct: 1   MNKNFSRFRLRSVVAVVASALAATAAWAVEPFTVRDIRVEGLQRVEAGTIFASLPLRVGD 60

Query: 58  TVDQLKLQQAIKSLYASTNFENISVSHEDGVLIVKVTERPTISAVTFEGNKDIKDEQLQE 117
           T    +   AI++L+    F+++ +     VL+V V ERPTI+ V F G K+     L +
Sbjct: 61  TYSDERGSAAIRALFELGLFKDVRIDVNGNVLVVIVEERPTIADVDFVGTKEFDKAALTK 120

Query: 118 SLDGSGVKVGESLDRTMLTGIEKGLQDFYYGVGKYGAKVEAQVINLPRNRVELKFKFTES 177
           +L   G+  G   D+ +    E+ L+  Y     Y A+V   V  + RNRV L F  TE 
Sbjct: 121 ALREVGLTDGRPYDKALTDRAEQELKRQYVSRSLYNAQVVTTVTPIERNRVNLTFTVTEG 180

Query: 178 LAAEIRQINVVGNHEFTDAELIGMLELKD--YVAWWDLFGERRYQKQKLQADLETIKTYY 235
            +A IR+++VVGN  F+++ L+ + +     +++W+      +Y + KL ADLET+++YY
Sbjct: 181 ESARIREVHVVGNKAFSESTLLSLFDQDSGGFMSWYTK--SNQYSRAKLNADLETLRSYY 238

Query: 236 HNKGYIRFEVTSTQVAMTPDRKGLYITINVNEGEKYKVKDVNLTGDLMGREELMKSILPI 295
             +GY+ F + STQVA++PDRK L +T+N++EGEK+ V  V L G+ +GR++  KS++ I
Sbjct: 239 ITRGYLEFRIDSTQVAISPDRKDLTVTVNISEGEKFVVAGVKLDGNYLGRDDEFKSLITI 298

Query: 296 KAGDMYNGGDVTFAEEMYSKYLGRFGYAYPEVKTYPEIDDKTKEVTLNINIKPGKRVYVR 355
           K G+ YNG  VT   + ++ Y G FGYA+  V+  P+ID     VTL +  +P +RVYVR
Sbjct: 299 KPGEPYNGEQVTETTKAFNDYFGTFGYAFARVQARPDIDRVNNRVTLTLQAEPSRRVYVR 358

Query: 356 SINFTGNTVTEDEVMRRELRQMEGAWLNSAQVEQSKARLNRLGFFETVDTETIQVPGTDD 415
            +   GN  T DEV+RRE RQ E +W +  +++ S+ R++RLGFF  V+ ET +VPG+ D
Sbjct: 359 RVMVGGNNKTRDEVIRREFRQYEASWYDGDKIKLSRDRVDRLGFFTEVNVETQEVPGSPD 418

Query: 416 LVDVAVKVKEQPSGSFNAGVGYGTESGLSLQFGVQQNNFLGTGNQAGVSLSTNKYSKNVN 475
            VD+ V V E+P+GS   G GY +   ++L FG+ Q N  G+GN  GV ++T+KY++ ++
Sbjct: 419 QVDLTVNVAEKPTGSLQLGAGYSSSDKVALTFGISQENVFGSGNFLGVQVNTSKYNRTLS 478

Query: 476 LSYTDPYWTKDGVSLGGSVYWNEFDANEANLE-RYKNSSYGVALNSGFPINEYNRINGGI 534
           L+ TDPY+TKDG+S   SVY         + +  YK  + G ++  G P +E + +  GI
Sbjct: 479 LTTTDPYFTKDGISRTISVYHTTTRPYSTSEDGDYKLVNQGASIRFGVPFSEVDTVFFGI 538

Query: 535 GY--------RHNTISEISAYEQALRFYNIYRDDDPNADLSFD-----NFELSLGWYRST 581
           G         R +  + +      L ++   +D      L  D        LS+GW R +
Sbjct: 539 GLERYAFDPNRSSIFAGLYTPNSYLSYFKCQKDSTGFFVLGCDQKSVWGVPLSVGWGRDS 598

Query: 582 LNRGTFPTDGSSQRLSGKMTVPASDLQYFKTDFDTNYYFPINRSQSFVLLARGRLGYGNG 641
            +    PT G  QR + ++ V   D++Y KT++    +F IN+  +F +   G +GY   
Sbjct: 599 RDSALTPTTGRLQRANLELGV-GGDMKYIKTNYQYQQFFAINKQYTFSV--NGEVGYAKA 655

Query: 642 YGQYNDNDQILPFWENYYSGGSSSLRGFKSNSVGPRSFYLFRGSEPCSPDPSGDGCSLPG 701
            G         P ++N+Y+GG  S+RGF+ NS+GPR   LF  ++               
Sbjct: 656 LG-----STTYPIFKNFYAGGLGSIRGFEQNSLGPRDVPLFGQTD--------------- 695

Query: 702 DPNKIQVSSGRSIGGNAIATASLELIVPTPFLDEAYTNSVRTSFFVDAGNVWDTEFDYAK 761
                    G ++GG   A  + EL   TPF       ++R   F D GNV+ +      
Sbjct: 696 ---------GAALGGTKKAIFNAEL--STPFPGAGNDRTLRLYSFFDIGNVFGSR----- 739

Query: 762 YQTLPAEEFDKLQDYSDPARIRASWGVSLQWLSPMGPMVFSLAWPVKEYEGDQTEIFSFN 821
                A      Q +S   ++RAS G+ + W+SP+GP+  + A+P+K     Q E+   N
Sbjct: 740 -----APGLTDAQ-WSAQKKLRASVGLGVSWISPLGPLRLAYAFPIK----SQKEVTDPN 789

Query: 822 IG 823
            G
Sbjct: 790 TG 791