Pairwise Alignments

Query, 826 a.a., bacterial surface antigen (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 832 a.a., outer membrane protein assembly factor BamA from Pontibacter actiniarum KMM 6156, DSM 19842

 Score =  160 bits (405), Expect = 3e-43
 Identities = 205/856 (23%), Positives = 372/856 (43%), Gaps = 125/856 (14%)

Query: 29  FEVTDIQVEGLQRVALGAALLSLPVKVGD--TVDQLKLQQAIKSLYASTNFENISVS-HE 85
           + + DI V G + +   A      +K GD  TV    + +AI++L+      ++ VS   
Sbjct: 39  YRIGDIAVSGYKFLDPIALTSLTGLKEGDMITVPGEDISRAIQNLWDQGILGDVDVSART 98

Query: 86  DGVLIV---KVTERPTISAVTFEGNKDIKDEQLQESLDGSGVKVGESLDRTMLTGIEKGL 142
           +G +I     +TERP +S   F G    + E L+E +    ++ G  +   +L      +
Sbjct: 99  EGDVIYLTFNLTERPRLSNFRFSGINKSQSETLREKVP---LQKGRIVTDAVLNSTRNAV 155

Query: 143 QDFYYGVGKYGAKVEA--QVINLPRNRVELKFKFTESLAAEIRQINVVGNHEFTDAELIG 200
           +++Y       AKV    +  ++  N V L     +    ++  I +VGN  F+D +L  
Sbjct: 156 REYYIDKSFLNAKVNITQRPDSVLPNSVVLNIHVDKGDKVKVGDIEIVGNEAFSDKKLER 215

Query: 201 MLELKDYVAWWDLFGERRYQKQKLQADLETIKTYYHNKGYIRFEVTSTQV-AMTPDRKGL 259
            L+      ++ +F   ++ + K + D E++  +Y+++GY    + S  V  ++ DR G+
Sbjct: 216 QLKNTKEKRFYKIFSSSKFNRTKFEEDKESLLAFYNSQGYRDATIVSDSVYRISDDRLGV 275

Query: 260 YITINVNEGEKYKVKDVNLTGDLMGREELMKSILPIKAGDMYNGGD----VTF--AEEMY 313
            IT  V+EG++Y  +++  TG+ +  +  +  +L I+ GD+Y+  +    +T+  A    
Sbjct: 276 QIT--VDEGQRYYYRNITWTGNYLYDDAYLARVLGIEKGDVYDQQELEKRLTYNPAGVDV 333

Query: 314 SKYLGRFGYAYPEVKTYPEIDDKTKEVTLNINIKPGKRVYVRSINFTGNTVTEDEVMRRE 373
           S      GY +  +    E+  +   + L + +  G +  +  I  TGN  T D V+ RE
Sbjct: 334 SALYQNDGYLFSSIDPV-EVRVEGDSIDLEMRVTEGPQATIDKIIITGNDKTSDHVILRE 392

Query: 374 LRQMEGAWLNSAQVEQSKARLNRLGFF--ETVDTETIQVPGTDDLVDVAVKVKEQPSGSF 431
           +R + G   +   + +++  L  LG+F  ET+    I  P  +  VD+A  V E+P+   
Sbjct: 393 IRTLPGQKYSRDDLIRTRNELAALGYFDPETIGLNPIPNP-AEGTVDIAYSVVERPNDQI 451

Query: 432 NAGVGYGTESGLSLQFGVQQNNF---------------LGTGNQAGVSLSTN-KYSKNVN 475
           +   G+G   G     G+  NNF                G G +  +++  N KY ++ +
Sbjct: 452 SLSGGWGGPIGAVGTVGLTLNNFSTRKMLDLSEWRPIPTGDGQRLSLNIQANGKYYQSYS 511

Query: 476 LSYTDPYW-----TKDGVSLGGSVYWNE---FDANEANLERYKNSSYGVALNSGFPIN-- 525
           LS+T+P+          VSL  ++Y N    ++  + N+ + +    G A++ G  +N  
Sbjct: 512 LSFTEPWLGGRKPNSLTVSLYRTIYRNASSYYNTADNNI-KSRLDVLGGAVSLGRRLNWP 570

Query: 526 -EYNRINGGIGYRHNTISEISAYEQALRFYNIYRDDDPNADLSFDNFELSLGWYRSTLNR 584
             Y  +N  + Y   T+ +   Y  A  F      D  +  +S  N   ++G  RS+++ 
Sbjct: 571 DNYFYMNHSLSYSRYTLDD---YPLAANF-----TDGTSNSISIVN---TIG--RSSVDN 617

Query: 585 GTFPTDGSSQRLSGKMTVPAS-----------DLQYFKTDFDTNYYFPINRSQSFVLLAR 633
            TFP  GSS  LS  +T P S            +++ K  FD +Y+  IN + + V   R
Sbjct: 618 PTFPRRGSSFTLSLNLTPPYSLFSDRDDDDYEFIEFNKWMFDASYF--INVAGNLVFNTR 675

Query: 634 GRLGYGNGYGQYNDNDQILPFWENYYSGGSSSLRGFKSNSVGPRSFYL-FRGSEPCSPDP 692
              G+   YG    + ++ PF E +  GG+    G    +V   + Y+  RG E      
Sbjct: 676 AHFGFLGTYG----SGEVGPF-ERFKVGGA----GLGGGNVFVGTEYIGLRGYE------ 720

Query: 693 SGDGCSLPGDPNKIQVSSGRSIGGNAIATASLELIVPTPFLDEAYTNSVRTSFFVDAGNV 752
                S+    N  ++ S   I  N     + +LI P P        ++    FV+AGN 
Sbjct: 721 ---DESVVNTNNDNELLSSGGIAYNKFVFEARQLISPNP------AATIYGLAFVEAGN- 770

Query: 753 WDTEFDYAKYQTLPAEEFDKLQDYSDPARIRASWGVSLQ-WLSPMGPMVFSLAWPVKEYE 811
                            F   ++Y +P ++  S GV  + ++S  G + F  AW +    
Sbjct: 771 ----------------NFGSYKNY-NPFKLYRSVGVGARIFMSAFGLLGFDYAWRLDTLP 813

Query: 812 G---DQTEIFSFNIGK 824
           G   D+  +F F IG+
Sbjct: 814 GQMDDKRGMFHFIIGQ 829