Pairwise Alignments

Query, 456 a.a., membrane-associated zinc metalloprotease, putative (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 385 a.a., RIP metalloprotease RseP from Magnetospirillum magneticum AMB-1

 Score =  153 bits (386), Expect = 1e-41
 Identities = 87/237 (36%), Positives = 131/237 (55%), Gaps = 9/237 (3%)

Query: 224 RPAIEPQIALISEGSAAANSDLKVGDTLVAINGQQYTDWQAFVDIIQHSANVPVELTVRR 283
           +P  +P I ++  G+AA  + LK GD + AING+    +Q    +++      + L+V R
Sbjct: 143 QPVTQPVIGMVHPGTAAEAAGLKAGDRITAINGRAVERFQDIQRMVRLEIENELSLSVAR 202

Query: 284 NGEQFAISVTPASIKNS----DGKEIGVLGVSPTQAQWPENMRLQLEYGPIDSFAIAADK 339
             + F +S  P  I+      D +++ VLG+S   A       + + +GPI +   A  +
Sbjct: 203 GDKAFDVSARPRIIQRKGVFGDMEKVPVLGISADPAS-----TVIVRHGPISALGEALAE 257

Query: 340 TWQLVAVSFKMIGKLFTGDVSVKNLSGPISIAQGAGNSANYGLVYFLGFLALISVNLGII 399
           T  +V  +F  IG++  G      L GPI IA+GAG +A  GL   + +  L+S+NLG+I
Sbjct: 258 TENMVRSTFIGIGQMVNGTRDTDELGGPIRIAKGAGEAAQLGLASVVFYTILLSLNLGLI 317

Query: 400 NLLPLPVLDGGHLLYYFVEVITGKPVSEKVQEIGFRFGAALLLMLMSIALFNDFARL 456
           NL P+P+LDGGHL++Y  E I G+P+ EK QE GFR G  L+L LM  A  ND   L
Sbjct: 318 NLFPIPILDGGHLMFYAFEAILGRPLGEKAQEYGFRIGLFLVLALMVFATRNDLVSL 374



 Score =  138 bits (347), Expect = 4e-37
 Identities = 93/264 (35%), Positives = 140/264 (53%), Gaps = 17/264 (6%)

Query: 11  FIVALGLLITAHEYGHFYVARRCGVKVERFSIGFGKTIWRKVGKDGTEYVVAMIPLGGYV 70
           F+V L +++  HE GHF +AR  GVKVE FSIGFG  +W +V  DGT + + ++PLGGYV
Sbjct: 21  FLVILTVVVFVHELGHFLIARWNGVKVEVFSIGFGPEVWGRVAADGTRWRIGLLPLGGYV 80

Query: 71  KMLDE------RVEDVP--EELKDQAFNRKSVWQRIAIVAAGPIANFIFAIIALYFMYLI 122
           KM  +         D P   E + QAF  K V QR AIV AGP ANF+FAI+ L  M+++
Sbjct: 81  KMFGDADAASATASDQPMTAEERAQAFCHKRVGQRAAIVVAGPAANFLFAILGLAGMFMV 140

Query: 123 -GVPSLKPVITSTTPGSAAAQIKVNEPMQVTAISGQAVRNWEEVNLALVGHIGDDSLTVS 181
            G P  +PVI    PG+AA    +    ++TAI+G+AV  ++++   +   I ++   +S
Sbjct: 141 LGQPVTQPVIGMVHPGTAAEAAGLKAGDRITAINGRAVERFQDIQRMVRLEIENE---LS 197

Query: 182 LAPLSGLQGLDTDTRTYTLDTRQWRFDPEKESPITTLGLGVYRPAIEPQIALISEGSAAA 241
           L+   G +  D   R   +  R+  F   ++ P+  +        I     + + G A A
Sbjct: 198 LSVARGDKAFDVSARPRIIQ-RKGVFGDMEKVPVLGISADPASTVIVRHGPISALGEALA 256

Query: 242 NSDLKVGDTLVAI----NGQQYTD 261
            ++  V  T + I    NG + TD
Sbjct: 257 ETENMVRSTFIGIGQMVNGTRDTD 280