Pairwise Alignments

Query, 456 a.a., membrane-associated zinc metalloprotease, putative (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 450 a.a., inner membrane zinc RIP metalloprotease; RpoE activator, by degrading RseA; cleaved signal peptide endoprotease from Escherichia coli BL21

 Score =  475 bits (1222), Expect = e-138
 Identities = 235/456 (51%), Positives = 318/456 (69%), Gaps = 6/456 (1%)

Query: 1   MLDFLWNLGSFIVALGLLITAHEYGHFYVARRCGVKVERFSIGFGKTIWRKVGKDGTEYV 60
           ML FLW+L SFIVALG+LIT HE+GHF+VARRCGV+VERFSIGFGK +WR+  K GTEYV
Sbjct: 1   MLSFLWDLASFIVALGVLITVHEFGHFWVARRCGVRVERFSIGFGKALWRRTDKLGTEYV 60

Query: 61  VAMIPLGGYVKMLDERVEDVPEELKDQAFNRKSVWQRIAIVAAGPIANFIFAIIALYFMY 120
           +A+IPLGGYVKMLDER E V  EL+  AFN KSV QR AI+AAGP+ANFIFAI A + ++
Sbjct: 61  IALIPLGGYVKMLDERAEPVVPELRHHAFNNKSVGQRAAIIAAGPVANFIFAIFAYWLVF 120

Query: 121 LIGVPSLKPVITSTTPGSAAAQIKVNEPMQVTAISGQAVRNWEEVNLALVGHIGDDSLTV 180
           +IGVP ++PV+      S AA+ ++    ++ A+ G    +W+ V L LV  IGD+S T+
Sbjct: 121 IIGVPGVRPVVGEIAANSIAAEAQIAPGTELKAVDGIETPDWDAVRLQLVDKIGDESTTI 180

Query: 181 SLAPLSGLQGLDTDTRTYTLDTRQWRFDPEKESPITTLGLGVYRPAIEPQIALISEGSAA 240
           ++AP    Q      R   LD R W F+P+KE P+++LG+    P IEP +  +   SAA
Sbjct: 181 TVAPFGSDQ-----RRDVKLDLRHWAFEPDKEDPVSSLGIRPRGPQIEPVLENVQPNSAA 235

Query: 241 ANSDLKVGDTLVAINGQQYTDWQAFVDIIQHSANVPVELTVRRNGEQFAISVTPASIKNS 300
           + + L+ GD +V ++GQ  T W  FV +++ +    + L + R G   ++++ P S K  
Sbjct: 236 SKAGLQAGDRIVKVDGQPLTQWVTFVMLVRDNPGKSLALEIERQGSPLSLTLIPES-KPG 294

Query: 301 DGKEIGVLGVSPTQAQWPENMRLQLEYGPIDSFAIAADKTWQLVAVSFKMIGKLFTGDVS 360
           +GK IG +G+ P     P+  ++  +YGP ++   A DKTWQL+ ++  M+GKL TGDV 
Sbjct: 295 NGKAIGFVGIEPKVIPLPDEYKVVRQYGPFNAIVEATDKTWQLMKLTVSMLGKLITGDVK 354

Query: 361 VKNLSGPISIAQGAGNSANYGLVYFLGFLALISVNLGIINLLPLPVLDGGHLLYYFVEVI 420
           + NLSGPISIA+GAG +A  G+VY+L FLALISVNLGIINL PLPVLDGGHLL+  +E I
Sbjct: 355 LNNLSGPISIAKGAGMTAELGVVYYLPFLALISVNLGIINLFPLPVLDGGHLLFLAIEKI 414

Query: 421 TGKPVSEKVQEIGFRFGAALLLMLMSIALFNDFARL 456
            G PVSE+VQ+  +R G+ LL++LM +ALFNDF+RL
Sbjct: 415 KGGPVSERVQDFCYRIGSILLVLLMGLALFNDFSRL 450