Pairwise Alignments

Query, 275 a.a., undecaprenyl diphosphate synthase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 242 a.a., Undecaprenyl diphosphate synthase (EC 2.5.1.31) from Variovorax sp. SCN45

 Score =  230 bits (587), Expect = 2e-65
 Identities = 118/234 (50%), Positives = 153/234 (65%), Gaps = 7/234 (2%)

Query: 36  LPKHVAIIMDGNGRWAQTQGKPRVMGHKAGVKAVRRAVSAASQLGIQSLTLFAFSSENWR 95
           +P HVAI+MDGNGRWA  +  PRV GHK GV+++RR V A +  G+  LT+FAFSSENW 
Sbjct: 8   VPHHVAIVMDGNGRWATRRFLPRVAGHKQGVESLRRCVKACADRGVGVLTVFAFSSENWN 67

Query: 96  RPDKEVSLLMELFFTVLQREIKLLDKNQVKLNIIGDISRFSARLQKQIRAAEEKTAGNSG 155
           RP +EVS LMEL    L RE+  L  + V+L  +G+    S ++ K +  AE  TA N  
Sbjct: 68  RPVEEVSGLMELMVGALAREVPRLSSDGVRLYFVGERGGLSPKMVKGLVDAEAATAHNER 127

Query: 156 LILNVAANYGGRWDILQAAQKLAEKVETGEMTSSQFTEEALSEHLCMQNQSEVDLIIRTG 215
           ++LNV  NYGGRWD+ QAA KL  + E         TE +L   + + +  + DL IRTG
Sbjct: 128 MVLNVCFNYGGRWDVAQAAAKLVARGEA-------VTEASLDRAMSLAHVPDPDLFIRTG 180

Query: 216 GDYRISNFVLWQAAYAELVFLDTLWPDFDEQAFHEAIATFANRQRRFGLTGSQI 269
           G+ R+SNF+LWQ+AYAEL F D LWP+FDE A  EAIA F  R+RRFG T +Q+
Sbjct: 181 GEQRLSNFLLWQSAYAELFFSDKLWPEFDEAALDEAIAAFQGRERRFGQTSAQV 234