Pairwise Alignments

Query, 275 a.a., undecaprenyl diphosphate synthase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 251 a.a., Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) from Pseudomonas putida KT2440

 Score =  264 bits (675), Expect = 1e-75
 Identities = 132/236 (55%), Positives = 164/236 (69%)

Query: 35  SLPKHVAIIMDGNGRWAQTQGKPRVMGHKAGVKAVRRAVSAASQLGIQSLTLFAFSSENW 94
           S+P+HVAIIMDGN RWA+ +  P V GHKAGV AVR  +   ++ G++ LTLFAFSSENW
Sbjct: 11  SVPRHVAIIMDGNNRWAKKRLLPGVAGHKAGVDAVRAVIEVCAKSGVEVLTLFAFSSENW 70

Query: 95  RRPDKEVSLLMELFFTVLQREIKLLDKNQVKLNIIGDISRFSARLQKQIRAAEEKTAGNS 154
           +RP +EV  LMELFF+ L+RE K LD+N + L IIGD SRF   LQ  +R AE  TAGN+
Sbjct: 71  QRPAEEVGALMELFFSALRREAKRLDENNISLRIIGDRSRFHPELQAAMREAEAVTAGNN 130

Query: 155 GLILNVAANYGGRWDILQAAQKLAEKVETGEMTSSQFTEEALSEHLCMQNQSEVDLIIRT 214
             IL +AANYGG+WDI QAAQ+LA +V+ G +     T   L   L   +    DL IRT
Sbjct: 131 RFILQIAANYGGQWDIAQAAQRLAREVQAGHLRPEDITPGLLQTCLATGDLPLPDLCIRT 190

Query: 215 GGDYRISNFVLWQAAYAELVFLDTLWPDFDEQAFHEAIATFANRQRRFGLTGSQID 270
           GG++RISNF+LWQ AYAEL F D  WPDF  +A   A+A FA+RQRRFG T  Q++
Sbjct: 191 GGEHRISNFLLWQLAYAELYFSDLYWPDFKHEAMRNALADFASRQRRFGKTSEQVE 246