Pairwise Alignments

Query, 275 a.a., undecaprenyl diphosphate synthase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 246 a.a., Undecaprenyl diphosphate synthase (EC 2.5.1.31) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  235 bits (599), Expect = 8e-67
 Identities = 122/241 (50%), Positives = 159/241 (65%), Gaps = 7/241 (2%)

Query: 32  VKQSLPKHVAIIMDGNGRWAQTQGKPRVMGHKAGVKAVRRAVSAASQLGIQSLTLFAFSS 91
           V   LP HVAI+MDGNGRWAQ +  PR  GHK GV A+R  V A  + G+  L++FAFSS
Sbjct: 1   VPAKLPGHVAIVMDGNGRWAQKRWLPRAAGHKQGVDALREVVKACIERGVGVLSVFAFSS 60

Query: 92  ENWRRPDKEVSLLMELFFTVLQREIKLLDKNQVKLNIIGDISRFSARLQKQIRAAEEKTA 151
           ENW RP +EVS LM+L    L RE+  L K+ V+L+  G+    SAR+ + + AAE +TA
Sbjct: 61  ENWNRPVEEVSGLMDLLAMALSREVPSLKKSGVQLHFPGNRGGLSARVVQGLEAAERETA 120

Query: 152 GNSGLILNVAANYGGRWDILQAAQKLAEKVETGEMTSSQFTEEALSEHLCMQNQSEVDLI 211
            N  L+LNV  NYGGRWDI QAA++LA++         + TEE+LS  + + +  + DL+
Sbjct: 121 HNRTLVLNVCFNYGGRWDIAQAARRLAQQ-------GVEITEESLSGAMALAHVDDPDLL 173

Query: 212 IRTGGDYRISNFVLWQAAYAELVFLDTLWPDFDEQAFHEAIATFANRQRRFGLTGSQIDE 271
           IRTGG+ RISNF+LWQ+AY EL+F D LWPDFD      A+  FA R+RRFG T  Q  E
Sbjct: 174 IRTGGELRISNFLLWQSAYTELLFTDCLWPDFDAAELDRALVEFARRERRFGQTAEQRAE 233

Query: 272 M 272
           +
Sbjct: 234 V 234