Pairwise Alignments

Query, 486 a.a., NOL1/NOP2/sun family putative RNA methylase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 422 a.a., Fmu (Sun) /eukaryotic nucleolar NOL1/Nop2p; tRNA and rRNA cytosine-C5-methylases from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  162 bits (409), Expect = 3e-44
 Identities = 124/440 (28%), Positives = 207/440 (47%), Gaps = 51/440 (11%)

Query: 66  LFDEILSAKQPADRVLANYFREHKKHGSKDRKVIRESLFSLFR-----WWGWFKAAGDHQ 120
           L +++   + PAD V+A +FRE++  G ++R  + ++++++ R      W     +G   
Sbjct: 13  LIEQVFKFEHPADAVVARHFRENRSLGPRERATLSDTVYAILRERLKLEWLARSGSGSKW 72

Query: 121 QAAHFFAMLSASALLEAHPWQDIAQAWHELSQSTHDYQRLQSIPVNNLTDKLALVRQLFP 180
           +     A       +++    D  + W +   +  D   L +   +NL D LA   +   
Sbjct: 73  RRLAILAFPGDRDFVKS-ALTDAEKTWLDHCDAVTDAD-LLAPHRHNLPDWLATALR--- 127

Query: 181 QVVLELTDLLPEWFWQVCPIDAKRRPNLIEAMSSRPPIWGRAQSINSQTAVSQLQALGIE 240
           + V +  D L     Q  P+D   R N+++A                  A++ LQ  G+ 
Sbjct: 128 EQVGDEFDALAASLNQPAPLDL--RVNVLKA--------------KRDAALAGLQKAGLT 171

Query: 241 ASLSPFFEDAINLGSKSMNLNEITLYKEGNIEIQDLASQVIGQICAPEPWQHWWDACSGA 300
            + +P+    I L  K  +L ++  + +G +E+QD  SQ++  +   +  +   D C+GA
Sbjct: 172 GAATPYSPLGIRLQGKP-SLAKLPAFVQGEVEVQDEGSQLLALLLDAKRGEMVVDFCAGA 230

Query: 301 GGKTLQLRSLMQTAATKQHTPLQGSIVSSDIRANALEELSKRAQRAQFDG---ISIARWR 357
           GGKTL + + M+ +         G + + D   + L+ L  R  R+       ++IA  R
Sbjct: 231 GGKTLAIGAAMRNS---------GRLYAFDTSGHRLDALKPRLARSGLSNVHPVAIAHER 281

Query: 358 SDALPVAANYFDGVLVDAPCSCTGTWRRNPDMRWLDTLDAVMDKATLQLDILSRSSQAVK 417
            D +   A   D VLVDAPCS  GT RR+PD++W  T   V  +A LQL IL+ +++ +K
Sbjct: 282 DDRIKRLAGKIDRVLVDAPCSGLGTLRRSPDLKWRQTPQTVAAQAELQLAILNSAARLLK 341

Query: 418 AGGTLIYATCSLSPVENEEVVSAFLQQHPEFNLVPIRHPF------------TGEQTEML 465
            GG L+YATCSL   ENE V +AF   HP+F  VP+                 GE  + L
Sbjct: 342 PGGRLVYATCSLLQAENEAVCAAFGPAHPDFEPVPVAGLLEGVHVSGASGLCAGENGDWL 401

Query: 466 TVWPFEANTDGMFVARMQRK 485
            +WP    TDG F A  +++
Sbjct: 402 RLWPHRHATDGFFAAVWRKR 421