Pairwise Alignments

Query, 486 a.a., NOL1/NOP2/sun family putative RNA methylase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 429 a.a., 16S rRNA m(5)C967 methyltransferase, SAM-dependent from Escherichia coli BL21

 Score =  112 bits (281), Expect = 2e-29
 Identities = 82/288 (28%), Positives = 138/288 (47%), Gaps = 30/288 (10%)

Query: 207 NLIEAMSSRPPIWGRAQSINSQ--TAVSQLQALGIEASLSPFFEDAINLGSKSMNLNEIT 264
           +++EA + RPP+W R    +    + ++ L   G++      + DA+ L + +  ++ + 
Sbjct: 163 SIVEANNQRPPMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAP-VHALP 221

Query: 265 LYKEGNIEIQDLASQVIGQICAPEPWQHWWDACSGAGGKTLQLRSLMQTAATKQHTPLQG 324
            +++G + +QD ++Q      AP+  +H  D C+  GGKT  +  +   A          
Sbjct: 222 GFEDGWVTVQDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPEA---------- 271

Query: 325 SIVSSDIRANAL-------EELSKRAQRAQFDGISIARWRSDALPVAANYFDGVLVDAPC 377
            +V+ DI    L       + L  +A   Q DG   ++W  +        FD +L+DAPC
Sbjct: 272 QVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYPSQWCGE------QQFDRILLDAPC 325

Query: 378 SCTGTWRRNPDMRWLDTLDAVMDKATLQLDILSRSSQAVKAGGTLIYATCSLSPVENEEV 437
           S TG  RR+PD++WL     + + A LQ +IL      +K GGTL+YATCS+ P EN   
Sbjct: 326 SATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQ 385

Query: 438 VSAFLQQHPEFNLVPIRHPFTGEQTEMLTVWPFEANTDGMFVARMQRK 485
           + AFLQ+  +  L     P    +  +    P     DG F A++ +K
Sbjct: 386 IKAFLQRTADAELCETGTPEQPGKQNL----PGAEEGDGFFYAKLIKK 429