Pairwise Alignments

Query, 598 a.a., peptidase, M1 family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 650 a.a., M1 family metallopeptidase from Brevundimonas sp. GW460-12-10-14-LB2

 Score =  449 bits (1154), Expect = e-130
 Identities = 249/611 (40%), Positives = 350/611 (57%), Gaps = 19/611 (3%)

Query: 3   IAPTAWDLTRDYHSFANTDQVQVTHLSLTLTVDFEARTLLGEAVLSLRYIESQVAELWLD 62
           IAP       D H+ A  +  +V  ++L LT DF A+TL G A L +  I     E+ LD
Sbjct: 37  IAPAPGPEAVDVHTHARPEIARVVDVALDLTADFNAKTLAGTATLDILAIPG-ANEIVLD 95

Query: 63  TRGLAILSVMTEAQVPLEFSLEESNEILGQKLSIRLPQLQCE---RVCIRYLTSMQAQGL 119
            R L I  V   A  PL + + +++ +LGQ L++ +P    +   ++ IRY T   A  L
Sbjct: 96  IRDLDIQDVRDAAGQPLRYVVGDNDAVLGQPLTVYVPAFAADERRKITIRYSTRPNAAAL 155

Query: 120 QWLAPEQTAGKQLPYLFSQSQPINARSWIPLQDTPKVRITFDAKVQVPKGMRAVMSAMNH 179
           QWL P QTAG Q PYLFSQ Q I  R+W+P QD+P +R T+ A++  P+ +  VMSA + 
Sbjct: 156 QWLNPSQTAGGQKPYLFSQGQAILTRTWVPTQDSPGIRQTYSARITAPEDLTVVMSADHL 215

Query: 180 P---ETPLEG--TFQFEMEKPIPTHLLALAVGDLAFQVIGPRSGVYTEPCMLEAAATEFA 234
               E    G  T++F M+ PIP +L+AL VGD+AF     R+GV+TEP  L AA  E  
Sbjct: 216 TPIGERAANGMKTWRFRMDNPIPPYLIALGVGDIAFAPFDGRTGVWTEPSRLRAAQWELE 275

Query: 235 DTEHMLDVAQSLLGPYAWGRYDMIILPPSFPFGGMENPRLAFLTPTLIAGDKSLVSTVAH 294
            T  M+  A+ L GPY WGRYD+++LPPSFPFGGMENP+L F TPT+IAGD+SLVS VAH
Sbjct: 276 PTAQMVTAAEKLYGPYRWGRYDLLVLPPSFPFGGMENPKLTFATPTIIAGDRSLVSLVAH 335

Query: 295 ELAHSWTGNLVSNATWRDLWLNEGFTTYFTNRIVEQVYGREQAELEWVIEFGRLQEEIAA 354
           ELAHSW+GNLV+NATW D WLNEGFT YF NRI+E VYG ++A  E V+ +  LQ+ + +
Sbjct: 336 ELAHSWSGNLVTNATWNDFWLNEGFTVYFENRIMESVYGHDRAMQEQVLGWDSLQDTLKS 395

Query: 355 LPLHRQTLPANVQQADPNLAFNRFTYDKASMFVHDLERRLGRAEFDKFLFTYVQHFAFKA 414
           LP     L  +++  DP+   N   Y+K ++F+  +ER +GR  FD +L  Y    A++ 
Sbjct: 396 LPAADTRLHLDLKGRDPDDGMNDIAYEKGALFLRTIERTVGRDRFDAWLRGYFDRNAYRP 455

Query: 415 ITTEMFVKYAKAALVEAYPDKISEAELLEWIYGEGLPQGYVGPTSRSLDKVDDALNDFLQ 474
           +TT MF++  +  L++      S+ ++  W+Y  GLP   V P S + + VD A   F +
Sbjct: 456 MTTAMFLQDIRDNLIKGDAALESQLQMDAWVYQPGLPSNTVAPVSHAFEPVDAAAVAFFK 515

Query: 475 GKA-AALLNVKSWRVHHWQYFLTQLPE-------VLSQVQLMDLDDSFKLTESNNAEIAC 526
            K  A+ +    W     Q FL   PE        L+  QL DL+ +  L    NAE+  
Sbjct: 516 DKGPASAIPWADWNTQQRQRFLGWRPEGLRTGADWLTDAQLADLERTLNLANEGNAELTF 575

Query: 527 DWFRVAIRNHYDPVLPALSRYLQRIGRGKFVRPLYAELNIAG--YHTELQSIYSSARSGY 584
            W ++A+ + Y P +    ++L   GR KFV PL+  L   G       + IY+ AR  Y
Sbjct: 576 AWLQIALAHRYQPSVATAEKFLTSQGRRKFVLPLFQTLWNEGDWGRGNARRIYAEARPLY 635

Query: 585 HPSIQVQLDRM 595
           HP     +D++
Sbjct: 636 HPVTSGSVDQL 646