Pairwise Alignments

Query, 432 a.a., phosphate regulon sensor protein PhoR (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 440 a.a., histidine kinase from Pseudomonas simiae WCS417

 Score =  338 bits (866), Expect = 3e-97
 Identities = 182/427 (42%), Positives = 274/427 (64%), Gaps = 5/427 (1%)

Query: 10  LFTRLAVFLLLCLLIGLLVGNPLWILIIGLLGLVIWHYRQLARLNFWLWRDRK-LTPPQG 68
           L   + + +  CLL+GL+ G   W L +G+   + W  +QL RL+ WL + +    PP G
Sbjct: 9   LIRHMLLLITGCLLVGLVSGYYGWSLAVGIALYLGWTLKQLLRLHEWLRQHKPDEAPPDG 68

Query: 69  SGSWEGVFNGIYRLQGKNRRRVGQLAALLGRFRQGAEALPDAAVVLDSEHNILWCNKLAQ 128
            G W  VF+ IY LQ +++R  G+L A++ R ++   AL DA ++LDS+ N+ W N+ A+
Sbjct: 69  YGLWGEVFDSIYHLQRRDQRVRGRLQAVIDRVQESTAALKDAVIMLDSDGNLEWWNRAAE 128

Query: 129 LMLGFVWPQDNGQRIDNLIRHPDFSAYIKAGKYKEPLELTSPVSERRLLEIRIMAYGDRQ 188
            +LG   PQD+GQ + NL+RHP F  Y +   Y+E LE+ SP ++R  +++ +  YG+ +
Sbjct: 129 TLLGLKTPQDSGQPVTNLVRHPRFKEYFEQENYEEALEIPSPTNDRVRIQLYLTRYGNNE 188

Query: 189 LLLIARDITRIRQLEGMRKEFVANVSHELKTPLTVLQGYLE-MMQSMAEPDSMNAKPLAL 247
            L++ RD+TRI QLE MRK+FVANVSHEL+TPLTV+ GYLE ++ ++ E +   ++ L  
Sbjct: 189 HLMLVRDVTRIHQLEQMRKDFVANVSHELRTPLTVICGYLETLLDNVDEINPRWSRALQQ 248

Query: 248 MQQQTQRMQSMVEQLLVLSRIEDAADIDLEN-TVNMSQLMDVLKEEAKALAKDK-YELSF 305
           MQQQ  RMQ+++  LL+L+++E A D   +N  V +  L+  +K +A AL+  +  +++ 
Sbjct: 249 MQQQGSRMQTLLNDLLLLAKLE-ATDYPSDNHPVAVQSLLQTIKNDALALSGQRGQQITL 307

Query: 306 HCEPGLDSHGNELQLRSACSNLISNAIRYTEPGGKISVQWRSVATGGLFSVADTGEGIAP 365
             +P +   G+E +LRSA SNL+ NA++YT   G I ++W +   G   SV D+G GI  
Sbjct: 308 EADPNVLLKGSEGELRSAFSNLVFNAVKYTPDKGNIRIRWWTDEQGAHLSVQDSGIGIDA 367

Query: 366 QHISRLTERFYRVDSARSRQTGGSGLGLAIVKHALSHHHSELNISSELGKGSTFSFVIPQ 425
           +H+ RLTERFYRVDS+R+  TGG+GLGLAIVKH L  H + L ISS LG GSTF+   P 
Sbjct: 368 KHLPRLTERFYRVDSSRNSNTGGTGLGLAIVKHVLLRHRARLEISSVLGHGSTFTCHFPP 427

Query: 426 HLIERKK 432
             + R +
Sbjct: 428 TQMTRSR 434