Pairwise Alignments

Query, 432 a.a., phosphate regulon sensor protein PhoR (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 431 a.a., sensory histidine kinase in two-component regulatory system with PhoB from Escherichia coli BL21

 Score =  433 bits (1114), Expect = e-126
 Identities = 220/422 (52%), Positives = 292/422 (69%), Gaps = 6/422 (1%)

Query: 13  RLAVFLLLC----LLIGLLVGNPLWILIIGLLGLVIWHYRQLARLNFWLWRDRKLTPPQG 68
           RL + LLLC     ++G   G   W L+  + GL+IWH+  L RL++WLW DR +TPP G
Sbjct: 9   RLVLELLLCCFPAFILGAFFGYLPWFLLASVTGLLIWHFWNLLRLSWWLWVDRSMTPPPG 68

Query: 69  SGSWEGVFNGIYRLQGKNRRRVGQLAALLGRFRQGAEALPDAAVVLDSEHNILWCNKLAQ 128
            GSWE +  G++++Q +N++R  +L  L+ RFR GAE+LPDA V+   E  I WCN LAQ
Sbjct: 69  RGSWEPLLYGLHQMQLRNKKRRRELGNLIKRFRSGAESLPDAVVLTTEEGGIFWCNGLAQ 128

Query: 129 LMLGFVWPQDNGQRIDNLIRHPDFSAYIKAGKYKEPLELTSPVSERRLLEIRIMAYGDRQ 188
            +LG  WP+DNGQ I NL+R+P+F+ Y+K   +  PL L   ++  R LEIR+M Y  +Q
Sbjct: 129 QILGLRWPEDNGQNILNLLRYPEFTQYLKTRDFSRPLNLV--LNTGRHLEIRVMPYTHKQ 186

Query: 189 LLLIARDITRIRQLEGMRKEFVANVSHELKTPLTVLQGYLEMMQSMAEPDSMNAKPLALM 248
           LL++ARD+T++ QLEG R+ F ANVSHEL+TPLTVLQGYLEMM       ++  K L  M
Sbjct: 187 LLMVARDVTQMHQLEGARRNFFANVSHELRTPLTVLQGYLEMMDEQPLEGAVREKALHTM 246

Query: 249 QQQTQRMQSMVEQLLVLSRIEDAADIDLENTVNMSQLMDVLKEEAKALAKDKYELSFHCE 308
           ++QTQRM+ +V+QLL LS+IE A    L   V++  ++ V++ EA+ L++ K   +F  +
Sbjct: 247 REQTQRMEGLVKQLLTLSKIEAAPTQLLNEKVDVPMMLRVVEREAQTLSQKKQTFTFEID 306

Query: 309 PGLDSHGNELQLRSACSNLISNAIRYTEPGGKISVQWRSVATGGLFSVADTGEGIAPQHI 368
            GL   GNE QLRSA SNL+ NA+ +T  G  I+V+W  V  G  FSV D G GIAP+HI
Sbjct: 307 NGLKVSGNEDQLRSAISNLVYNAVNHTPEGTHITVRWLRVPHGAEFSVEDNGPGIAPEHI 366

Query: 369 SRLTERFYRVDSARSRQTGGSGLGLAIVKHALSHHHSELNISSELGKGSTFSFVIPQHLI 428
            RLTERFYRVD ARSRQTGGSGLGLAIVKHA++HH S LNI S +GKG+ FSFVIP+ LI
Sbjct: 367 PRLTERFYRVDKARSRQTGGSGLGLAIVKHAVNHHESRLNIESTVGKGTRFSFVIPERLI 426

Query: 429 ER 430
            +
Sbjct: 427 AK 428