Pairwise Alignments

Query, 518 a.a., GGDEF domain protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 800 a.a., Sensory box protein from Pseudomonas putida KT2440

 Score =  110 bits (276), Expect = 1e-28
 Identities = 63/163 (38%), Positives = 89/163 (54%), Gaps = 3/163 (1%)

Query: 352 EQQKLNLLDSLTQLPNRAALEERMELEYRNYQRHKSPLWIAVADIDHFKIINDSFGHSTG 411
           E + L++ DSLT + NR   +ER+++E    QR   PL + + DIDHFK IND FGH+ G
Sbjct: 636 ELRALSVTDSLTGIHNRRYFQERLKIELERAQRDGLPLAVIMLDIDHFKRINDRFGHAVG 695

Query: 412 DKTLQVIAMALKNSLRDTEFVARYGGEEFVLILPDIDDSDIAQLLNRVREKVKNIPFKFK 471
           D+ L+ +   +   LR T+   R GGEEF+++ P  D +    L   + + V+N+P +  
Sbjct: 696 DRVLRSLCQRIAQRLRRTDVFCRLGGEEFMVLCPGSDANQARLLALELWQGVRNVPVEGV 755

Query: 472 NQRITVTVSIGAARVMGNELIHETFERADAALYKAKHESRDRV 514
            Q   VT S G A     E       RADA +Y AK   RDRV
Sbjct: 756 GQ---VTASFGVAGWRSGEGADALLLRADAGVYAAKQAGRDRV 795