Pairwise Alignments

Query, 518 a.a., GGDEF domain protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 493 a.a., GGDEF domain protein from Pseudomonas putida KT2440

 Score =  119 bits (298), Expect = 3e-31
 Identities = 58/161 (36%), Positives = 94/161 (58%)

Query: 354 QKLNLLDSLTQLPNRAALEERMELEYRNYQRHKSPLWIAVADIDHFKIINDSFGHSTGDK 413
           + L  LDSLT L NR + +       R  +R  SPL   + D+DHFK +ND+ GH  GD+
Sbjct: 326 EALATLDSLTGLYNRRSFDLLAAQALREARRDSSPLVALLIDLDHFKALNDNHGHLAGDE 385

Query: 414 TLQVIAMALKNSLRDTEFVARYGGEEFVLILPDIDDSDIAQLLNRVREKVKNIPFKFKNQ 473
            L+  A  L+ SLR ++ + R+GGEEF+++L + +     ++  ++R + + + F + NQ
Sbjct: 386 VLRQFANVLQGSLRQSDILCRWGGEEFIVLLREAEGRQAIEVAEKIRRRTEQLTFSYDNQ 445

Query: 474 RITVTVSIGAARVMGNELIHETFERADAALYKAKHESRDRV 514
            + +T SIG + +   + +H    RAD ALY+AK   R+RV
Sbjct: 446 PLRLTTSIGLSSLQPGDTLHALLTRADRALYRAKQAGRNRV 486