Pairwise Alignments

Query, 518 a.a., GGDEF domain protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 357 a.a., YaiC/YhcK/ArdA family protein from Pseudomonas putida KT2440

 Score =  112 bits (281), Expect = 2e-29
 Identities = 66/181 (36%), Positives = 109/181 (60%), Gaps = 11/181 (6%)

Query: 338 ELSNEANTYKERLFEQQKLNLLDSLTQLPNRAALEERMELEYRNYQRHKSPLWIAVADID 397
           +L+ +   +K RL     L+L DSLT L N  A ++ ++L+++  ++ +    IA+ DID
Sbjct: 168 QLAIKLGDHKRRL---SALSLTDSLTGLFNHGAWKDLLQLKFQACKQQQGHAVIALIDID 224

Query: 398 HFKIINDSFGHSTGDKTLQVIAMALKNSLRDTEFVARYGGEEFVLILPDIDDSDIAQLLN 457
           HFK IND+FGH  GD  L+ ++  L+ SLR+ +   RYGG+EF +ILP+  ++   Q + 
Sbjct: 225 HFKTINDTFGHVVGDCVLRQLSAELRRSLREGDQAGRYGGDEFCVILPETSEAQACQAME 284

Query: 458 RVREKVKNIPFKFKNQR---ITVTVSIGAARVMGN-ELIHETFERADAALYKAKHESRDR 513
           R+RE+V +    ++N +   + +++SIG +    + E      E+AD ALY AKH  RD+
Sbjct: 285 RLRERVSS----YRNPQLPHLRISLSIGLSPFQASLESPEHWLEQADKALYIAKHAGRDQ 340

Query: 514 V 514
           V
Sbjct: 341 V 341