Pairwise Alignments

Query, 518 a.a., GGDEF domain protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 532 a.a., sensor domain-containing diguanylate cyclase from Pectobacterium carotovorum WPP14

 Score =  112 bits (281), Expect = 3e-29
 Identities = 67/188 (35%), Positives = 104/188 (55%), Gaps = 22/188 (11%)

Query: 332 MRKELNELSNEANTYKERLFEQQKLNLLDSLTQLPNRAALEERMELEYRNYQRHKSPLWI 391
           + K + +LS +A+T              D LT L NR  + E +EL         + +  
Sbjct: 355 LHKRIGKLSLQAHT--------------DPLTGLLNRRGIYESIELILSK----SNQVAA 396

Query: 392 AVADIDHFKIINDSFGHSTGDKTLQVIAMALKNSLRDTEFVARYGGEEFVLILPDIDDSD 451
            V DIDHFK +ND++GH+ GD  ++++A  +K   R+++ + R GGEEF+ +LPD D + 
Sbjct: 397 IVIDIDHFKRVNDTYGHNVGDDVIRLLAKNIKQGARESDLICRTGGEEFLALLPDTDMTQ 456

Query: 452 IAQLLNRVREKVKNIPFKFKNQRITVTVSIG-AARVMGNELIHETFERADAALYKAKHES 510
            A +  R+R+KV+ +P         +T+S+G    + G E I    + AD ALY+AKHE 
Sbjct: 457 AADIAERLRKKVEKMPLPIPE---NITISLGVTCFIPGMEQIDSVLKIADDALYQAKHEG 513

Query: 511 RDRVVIDV 518
           R+RVVI V
Sbjct: 514 RNRVVIKV 521