Pairwise Alignments

Query, 518 a.a., GGDEF domain protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 498 a.a., GGDEF domain-containing protein from Magnetospirillum magneticum AMB-1

 Score =  115 bits (288), Expect = 4e-30
 Identities = 74/193 (38%), Positives = 104/193 (53%), Gaps = 18/193 (9%)

Query: 325 LRKSMETMRKELNELSNEANTYKERLFEQQKLNLLDSLTQLPNRAALEERMELEYRNYQR 384
           LR  + T+R+   EL  +A+T              D LT +PNR  L    E E     R
Sbjct: 314 LRSYLTTVRQR-EELRRQADT--------------DPLTGVPNRRHLMSVAEHELARTLR 358

Query: 385 HKSPLWIAVADIDHFKIINDSFGHSTGDKTLQVIAMALKNSLRDTEFVARYGGEEFVLIL 444
           +   L + + DIDHFK IND++GH TGD+ +QV+A A+  S R+ +   R GGEEF  +L
Sbjct: 359 YGGALALFMVDIDHFKAINDTWGHPTGDRVIQVLAAAMAASAREQDTAGRLGGEEFAAVL 418

Query: 445 PDIDDSDIAQLLNRVREKVKNIPFKF--KNQRITVTVSIGAARV-MGNELIHETFERADA 501
           P+ D    A +  R+RE V+ I      + Q +  TVSIG A + +G+  + +   RAD 
Sbjct: 419 PETDLEGAAIMAERLREAVEAITSALDDQGQPVRFTVSIGVAAIQLGDGSVEDILGRADR 478

Query: 502 ALYKAKHESRDRV 514
           ALY AKH  R+RV
Sbjct: 479 ALYAAKHGGRNRV 491