Pairwise Alignments

Query, 622 a.a., deoxyxylulose-5-phosphate synthase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 644 a.a., 1-deoxy-D-xylulose-5-phosphate synthase from Magnetospirillum magneticum AMB-1

 Score =  568 bits (1465), Expect = e-166
 Identities = 308/623 (49%), Positives = 412/623 (66%), Gaps = 13/623 (2%)

Query: 10  VLAQANTPNELRQLPQALLPQLADELREFLLKSVGMSSGHFASGLGTVELTVALHYVYNT 69
           +L + ++P ++R      L QL  E+R+ +++SV  + GH  +GLG  ELTVALH++++T
Sbjct: 14  LLDRVSSPADIRDFSIEELEQLTYEVRQEMIQSVSFTGGHLGAGLGVAELTVALHHIFDT 73

Query: 70  PFDRLIWDVGHQAYPHKILTGRRDRMHTIRQKNGLHPFPWREESEYDTFSVGHSGTSISA 129
           P DRLIWDVGHQAYPHKILTGRR RM T+RQ  GL  F  R ESEYD F  GHS TSISA
Sbjct: 74  PRDRLIWDVGHQAYPHKILTGRRGRMRTMRQGGGLSGFTRRSESEYDPFGAGHSSTSISA 133

Query: 130 ALAMAVAAEKEQAGRKVVAVIGDGAMTGGMVFEAMNHAGDLHNDMLMVLNDNEMSISENV 189
           AL MAVA + + A   V+AVIGDGAM+ G  +EAMN+AG   + ++++LNDN+MSI+  V
Sbjct: 134 ALGMAVARDLKGATNNVIAVIGDGAMSAGQAYEAMNNAGAAGSRLIVILNDNDMSIAPPV 193

Query: 190 GALNNHLAQLMSGRFYTTIRESSKKVLKGMPVIKEMAK-RTEEHLKGMVVPG-TLFEELG 247
           GAL+ HL++L+S   Y ++R   K +   +P   E A  R EE+ +GMV  G TLFEELG
Sbjct: 194 GALSAHLSRLLSSPSYHSLRHLVKDLAHLLPPSLERAVGRAEEYARGMVSGGGTLFEELG 253

Query: 248 FNYIGPIDGHDVDALVETLRNMRNLKG--PQVLHIMTKKGRGYEPAEKDPIGWHAVPKFD 305
           F Y+GPIDGH+ + L+  L+N+R+     P +LH++TKKGRGY PAE     +H V +FD
Sbjct: 254 FYYVGPIDGHNFEHLLPVLKNLRDSDDTKPVMLHVVTKKGRGYPPAEAAADKYHGVGRFD 313

Query: 306 PSLFKKPATKPGLPTFSQVFGKWLCDIAEQDEKVLGITPAMREGSGMVEFSQRFPKQYFD 365
               +    K   P+++ VF K L   AE D++V+ IT AM  G+G+ +F  RFP + FD
Sbjct: 314 VLTGQLEKPKANAPSYTSVFAKALIAEAEVDDRVVAITAAMPGGTGLDKFGDRFPARTFD 373

Query: 366 AAIAEQHAVTLGAGFACEGYKPVVAIYSTFLQRGYDQLIHDVALQRLPVLFAIDRGGIVG 425
             IAEQHAVT   G A EG+KP  AIYS+FLQR YDQ+ HDV LQ+LPV FAIDR G+VG
Sbjct: 374 VGIAEQHAVTFAGGLATEGFKPFCAIYSSFLQRAYDQVQHDVVLQKLPVRFAIDRAGLVG 433

Query: 426 ADGPTHQGAFDLSFMRCIPNMVIMAPSDENECRQMLYTGYCYDAGPSAVRYPRGSATGAT 485
           ADG TH G++D++F+ C+P++VIM PSDE +    + T    D  PSA RYPRG   G  
Sbjct: 434 ADGATHAGSYDMAFLGCLPDIVIMCPSDEADLMHAVATAVSIDDRPSAFRYPRGEGVGIE 493

Query: 486 QVEAMTALPIGKGVIKRLGKRIALLNFGTTLAAALTAAESLDA-----TVVDMRFVKPLD 540
             E  + +PIGKG + R G R+A+L+ GT LA AL AA+ L A     TVVD RF+KPLD
Sbjct: 494 LSERGSVMPIGKGRVVREGNRVAILSLGTRLAEALKAADELAARGLAPTVVDARFMKPLD 553

Query: 541 VDLVKEMAQTHDVLVTVEENAIMGGAGSGVLELLQQ---LKMPKPVLQIGLPDEFIKHGS 597
            +L+  +A+ H+VL+TVEE ++ GG GS VL LL     L     V  + LPD F++H +
Sbjct: 554 EELILRLAREHEVLITVEEGSV-GGFGSHVLHLLASKGALDNGLKVRPLALPDVFVEHDA 612

Query: 598 PDEVIHDLQLDAEGMLAQINAYL 620
           P      + L+A G++A + A L
Sbjct: 613 PAIQYEKIGLNASGIVATVLATL 635