Pairwise Alignments

Query, 622 a.a., deoxyxylulose-5-phosphate synthase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 637 a.a., 1-deoxy-D-xylulose-5-phosphate synthase from Brevundimonas sp. GW460-12-10-14-LB2

 Score =  548 bits (1413), Expect = e-160
 Identities = 300/617 (48%), Positives = 393/617 (63%), Gaps = 12/617 (1%)

Query: 9   PVLAQANTPNELRQLPQALLPQLADELREFLLKSVGMSSGHFASGLGTVELTVALHYVYN 68
           P+L    TP + R    A L QLA E+R   + +V ++ GH  +GLG VELT ALH+V+ 
Sbjct: 6   PLLDTVKTPADTRDFDIAQLKQLAQEVRAETIDAVSVTGGHLGAGLGVVELTTALHHVFE 65

Query: 69  TPFDRLIWDVGHQAYPHKILTGRRDRMHTIRQKNGLHPFPWREESEYDTFSVGHSGTSIS 128
           TP D LIWDVGHQ YPHKILTGRRDR+ T+RQ  GL  F  R ESEYD F   H+ TSIS
Sbjct: 66  TPKDILIWDVGHQCYPHKILTGRRDRIRTLRQGGGLSGFTKRSESEYDPFGAAHASTSIS 125

Query: 129 AALAMAVAAEKEQAGRKVVAVIGDGAMTGGMVFEAMNHAGDLHNDMLMV-LNDNEMSISE 187
           AAL  A A +++    +VVAVIGDG+M+ GM +EAMN+A +  +  LMV LNDN+MSI+ 
Sbjct: 126 AALGFAAARDQKGEKNRVVAVIGDGSMSAGMAYEAMNNAAEATSGQLMVILNDNDMSIAP 185

Query: 188 NVGALNNHLAQLMSGRFYTTIRESSKKVLKGMP-VIKEMAKRTEEHLKGMVVPGTLFEEL 246
            VG ++ +LA L+SG  Y  +R   K V + +P   ++ AK+ EE+ +GMV  GT FEEL
Sbjct: 186 PVGGMSAYLAGLVSGGAYQNVRRLGKTVAQHLPRPFRKAAKKAEEYARGMVTGGTFFEEL 245

Query: 247 GFNYIGPIDGHDVDALVETLRNMRNLKG-PQVLHIMTKKGRGYEPAEKDPIGWHAVPKFD 305
           GF Y+GPIDGHD+D LV  L+    ++  P ++H++T+KG+GY PAE      HAV KFD
Sbjct: 246 GFYYVGPIDGHDMDNLVPILKKAAAIEDRPVLVHVVTQKGKGYAPAESSADKLHAVVKFD 305

Query: 306 PSLFKKPATKPGLPTFSQVFGKWLCDIAEQDEKVLGITPAMREGSGMVEFSQRFPKQYFD 365
               K+       P++++VFG  L   A+ D  ++ IT AM  G+G+  F Q FP++ +D
Sbjct: 306 VVSGKQAKAISNAPSYTKVFGTELIKHAKVDPSIVAITAAMPSGTGLDLFGQAFPERTYD 365

Query: 366 AAIAEQHAVTLGAGFACEGYKPVVAIYSTFLQRGYDQLIHDVALQRLPVLFAIDRGGIVG 425
             IAEQHAVT  AG A +G KPV AIYSTFLQRGYDQ++HDVA+Q LPV FA+DR G+VG
Sbjct: 366 VGIAEQHAVTFAAGLAADGMKPVCAIYSTFLQRGYDQVVHDVAIQSLPVRFAMDRAGLVG 425

Query: 426 ADGPTHQGAFDLSFMRCIPNMVIMAPSDENECRQMLYTGYCYDAGPSAVRYPRGSATGAT 485
           +DG TH G+FD+ FM  +P MV+MA +DE E   M+ T    D  PSA RYPRG   G  
Sbjct: 426 SDGATHAGSFDIGFMGALPGMVLMAAADEAELAAMISTSLAIDDRPSAFRYPRGDGVGVE 485

Query: 486 QVEAMTALPIGKGVIKRLGKRIALLNFGTTL-----AAALTAAESLDATVVDMRFVKPLD 540
             E    L IGKG I R G  +A+L+ GT L     AA + AA  + ATV D RF KPLD
Sbjct: 486 IPELPAPLEIGKGRIVREGTSVAILSLGTRLQESLKAADMLAARGVSATVADARFAKPLD 545

Query: 541 VDLVKEMAQTHDVLVTVEENAIMGGAGSGVLELLQQ---LKMPKPVLQIGLPDEFIKHGS 597
            DL+  +A+ H+ L+TVEE A MGG G+ VL+LL +   L     +  + LPD F    +
Sbjct: 546 ADLILRLAREHEALITVEEGA-MGGFGAFVLQLLAEKGALDGGLKIRTLNLPDVFQDQDA 604

Query: 598 PDEVIHDLQLDAEGMLA 614
           P  +     L+AE + A
Sbjct: 605 PMAMYAQAGLNAEHITA 621