Pairwise Alignments

Query, 622 a.a., deoxyxylulose-5-phosphate synthase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 658 a.a., 1-deoxy-D-xylulose-5-phosphate synthase from Bosea sp. OAE506

 Score =  573 bits (1477), Expect = e-168
 Identities = 301/616 (48%), Positives = 412/616 (66%), Gaps = 11/616 (1%)

Query: 9   PVLAQANTPNELRQLPQALLPQLADELREFLLKSVGMSSGHFASGLGTVELTVALHYVYN 68
           P+L    +P +LR+L Q  L QLADELR   + +V ++ GH  +GLG VELTVALH++++
Sbjct: 5   PLLDGVTSPADLRRLSQPQLKQLADELRAETIDAVSVTGGHLGAGLGVVELTVALHHLFD 64

Query: 69  TPFDRLIWDVGHQAYPHKILTGRRDRMHTIRQKNGLHPFPWREESEYDTFSVGHSGTSIS 128
           TP D LIWDVGHQAYPHKILTGRRDR+ T+RQ  GL  F  REESE+D F   H+ TSIS
Sbjct: 65  TPRDTLIWDVGHQAYPHKILTGRRDRIRTLRQGGGLSGFTKREESEFDPFGAAHTSTSIS 124

Query: 129 AALAMAVAAEKEQAGRKVVAVIGDGAMTGGMVFEAMNHAGDLHNDMLMVLNDNEMSISEN 188
           A L  AVA + +     VVAVIGDGAM+ GM +EAMN+AG L   ++++LNDN+MSI+  
Sbjct: 125 AGLGFAVARDLKGEDGHVVAVIGDGAMSAGMAYEAMNNAGALGKRLIVILNDNDMSIAPP 184

Query: 189 VGALNNHLAQLMSGRFYTTIRESSKKVLKGMPV-IKEMAKRTEEHLKGMVVPGTLFEELG 247
           VGAL+ HLA+L+SG+ Y ++R+  +++ + +   +     R  EH +G +  GTLF++LG
Sbjct: 185 VGALSAHLARLLSGKAYLSLRDQGRQLTRRLGRGLDSKITRAVEHARGYLTGGTLFDQLG 244

Query: 248 FNYIGPIDGHDVDALVETLRNMRNL-KGPQVLHIMTKKGRGYEPAEKDPIGWHAVPKFDP 306
           F Y+GPIDGH++D L+  LRN+R+   GP ++H++T+KG+GY PAE     +HAV +FD 
Sbjct: 245 FYYVGPIDGHNLDHLIPVLRNVRDAPNGPILVHVVTQKGKGYAPAEATADKYHAVVRFDV 304

Query: 307 SLFKKPATKPGLPTFSQVFGKWLCDIAEQDEKVLGITPAMREGSGMVEFSQRFPKQYFDA 366
           +  ++       P++++VF + L   A +DE+++ IT AM  G+G+  F++  P ++FD 
Sbjct: 305 ATGQQEKAPAAAPSYTKVFSQALLREAARDERIVAITAAMPSGTGLDAFAKAHPSRFFDV 364

Query: 367 AIAEQHAVTLGAGFACEGYKPVVAIYSTFLQRGYDQLIHDVALQRLPVLFAIDRGGIVGA 426
            IAEQHAVT  AG ACEG KPV AIYSTFLQR YDQ++HDVALQ+LPV FAIDR G+VGA
Sbjct: 365 GIAEQHAVTFAAGLACEGLKPVCAIYSTFLQRAYDQIVHDVALQKLPVRFAIDRAGLVGA 424

Query: 427 DGPTHQGAFDLSFMRCIPNMVIMAPSDENECRQMLYTGYCYDAGPSAVRYPRGSATGATQ 486
           DG TH GAFD +++ C+P  V+MA +DE +   M+ T   +D GP A+RYPRG   G   
Sbjct: 425 DGATHAGAFDTAYLGCLPGFVLMAAADEADLVHMVATACAHDEGPIALRYPRGEGLGVAL 484

Query: 487 VEAMTALPIGKGVIKRLGKRIALLNFGTTLAAALTAAESLDA-----TVVDMRFVKPLDV 541
            E    L IG+G + R G R+A+L++GT L   L AAE LDA     TV D RF KPLD 
Sbjct: 485 PETGMPLEIGRGRVLREGTRVAILSYGTRLGECLEAAELLDAMGLSTTVADARFAKPLDR 544

Query: 542 DLVKEMAQTHDVLVTVEENAIMGGAGSGVLELLQQLKMPKPVLQI---GLPDEFIKHGSP 598
            L++ +AQ H+ L+TVEE ++ GG GS VL  L    + +  L+I    LPD F    S 
Sbjct: 545 ALIRRLAQHHEALITVEEGSV-GGFGSFVLHALADDGLFEAGLKIKTLTLPDRFQDQDSQ 603

Query: 599 DEVIHDLQLDAEGMLA 614
             +     LDA+ ++A
Sbjct: 604 ARLYAQAGLDADAIVA 619