Pairwise Alignments

Query, 448 a.a., MATE efflux family protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 451 a.a., multidrug transporter MATE from Pseudomonas simiae WCS417

 Score = 99.4 bits (246), Expect = 2e-25
 Identities = 111/432 (25%), Positives = 187/432 (43%), Gaps = 28/432 (6%)

Query: 11  QRLLQEPIAKLFWRYTIPTIASMLVTGVYVTIDGIFVGHYLGETGLAGMMLAYPVGAILY 70
           Q  LQ P+ +++  +  P + S  +     T++GI+VG  LG   LA +   +P+     
Sbjct: 2   QSPLQRPLWQIYLIFLAPMVLSNFLQSFSGTLNGIYVGQMLGTQALAAVSGMFPIVFFFI 61

Query: 71  AIGAMIGMGSAALVSINLGQGNVAKARKLLGNAFSLCLLAGAFFALVGGVFSRDILIALG 130
           A+   +G G++ L+    G    A  + + G   +L  L G   A++G +F+R  L ALG
Sbjct: 62  ALVIGLGAGASVLIGQAWGAQETAMVKAITGATLTLGALVGVVAAVLGSLFARPALQALG 121

Query: 131 AEGEILENANEYLFWYFALCHFPIISMAFTTLLRNDG---RPSMVTFVLILGGVLNT--- 184
              ++L++A  Y      +    ++ + +T LLR       P +   V  L G+L T   
Sbjct: 122 TPVDVLDDAVGYAQKMMLIMPLLLVFILYTQLLRGVSDTISPLLALMVSTLVGLLLTPAL 181

Query: 185 FLDWLFIVVFPFGLAGAAIATMLSQAVTGLLCLQHFFGARTQLKINLEQM-KLKLDNCI- 242
              W+ +   P G+  A  A ++  A+  L  +         +  + E +  L+LD  I 
Sbjct: 182 IRGWVGLP--PMGIQSAVYAGLVGNALAMLFLILRLRHKNHVMAPDRELLAALRLDRVIL 239

Query: 243 -NIARVGLPSFLMNLYLS----IVLTLHNTAFLWVGGPLHVAAYGVVSYTEAFFYLIFEG 297
             + R+GLP+ L  + LS    ++L L N       G    AAYG V  T+   Y+ F  
Sbjct: 240 GKVLRIGLPTGLQMVVLSLSELVILALVNG-----HGSQATAAYGAV--TQIVNYVQFPA 292

Query: 298 IALG-TQPIYSFNA-GAGRFDRVKQ-ARNIAFSMTLLTAALGLVLIYSRPEWLVYLFAGD 354
           +++  T  I    A GAGR +R+    R      T LT  L +VL Y    WL+ LF  D
Sbjct: 293 LSIAITASILGAQAIGAGRLERIGPILRTGLLINTCLTGGL-IVLGYVLSHWLLGLFITD 351

Query: 355 NPSLTPVAIEGMRWYFWGLPMEGLILVGASFFQAINCSKQASILT-GAKLILIAAIIYCF 413
           + +    A   +    W + + G   V     +A        +++    L +   + Y  
Sbjct: 352 DAARVN-AEHLLHIMLWSILVFGFQAVIGGIMRASGVVLMPVVISIFCVLCVELPMAYLL 410

Query: 414 AWAFGVIGVWVS 425
              FG+ GVW++
Sbjct: 411 NAHFGLEGVWMA 422