Pairwise Alignments

Query, 448 a.a., MATE efflux family protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 464 a.a., MATE family efflux transporter from Pontibacter actiniarum KMM 6156, DSM 19842

 Score =  104 bits (260), Expect = 5e-27
 Identities = 113/430 (26%), Positives = 184/430 (42%), Gaps = 29/430 (6%)

Query: 27  IPTIASMLVTGVYVTIDGIFVGHYLGETGLAGMMLAYPVGAILYAIGAMIGMGSAALVSI 86
           IP I  M++  ++  +D  FVG  LG   LA + L   V  I+YA+G  I + + A+VS 
Sbjct: 36  IPMILEMMMESLFAIVDIFFVGK-LGANALATVGLTESVLMIIYAVGMGISIAATAMVSR 94

Query: 87  NLGQGNVAKARKLLGNAFSLCLLAGAFFALVGGV---FSRDILIALGAEGEILENANEYL 143
            +G+ N ++A  +    F L +   A   L+GG+   F+ + L  LGA  E++     Y 
Sbjct: 95  RVGEKNYSEAGSI---TFQLIVTGVALALLMGGLATFFAAETLALLGAAPEVIATGVTYA 151

Query: 144 FWYFALCHFPIISMAFTTLLRNDGRPSMVTFVLILGGVLNTFLDWLFIV----VFPFGLA 199
              FA     I+        R  G+P +    L L    N  LD L I     +   GLA
Sbjct: 152 QIIFAGNVAIILLFLINGAFRGAGQPHLAMRALWLANGANIILDPLLIFGLGSIEGLGLA 211

Query: 200 GAAIATMLSQAVTGLLCLQHFFGARTQLKINLEQMKLKLDNCINIARV---GLPSFLMNL 256
           GAA AT + +++  L  L H F  +  LK+  E M L +   I I ++   G+  +L++ 
Sbjct: 212 GAAWATTIGRSIGVLYQLYHLFNGKHLLKLTRENMVLSVGVIIRILKLASGGVGQYLIDS 271

Query: 257 YLSIVLTLHNTAFLWVGGPLHVAAYGVVSYTEAFFYLIFEGIALGTQPIYSFNAGAGRFD 316
              I LT     F    G   +A Y V      F  L   G++     +   N GA +  
Sbjct: 272 ASWIFLTRLMAEF----GSSALAGYTVAFRIIMFTLLPAWGLSSAAATLVGQNLGAQKAK 327

Query: 317 RVKQA--RNIAFSMTLLTAALGLVLIYSRPEWLVYLFAGDNPSLTPVAIEGMRWYFWGLP 374
           R + A      ++M  + A   + +++   E L   F  D   +  VA E ++    G  
Sbjct: 328 RAELAVWLTARYNMVFMAAVTLVFILFG--EHLSDFFT-DEAVVISVATEALQIITLGYV 384

Query: 375 MEGLILVGASFFQAINCSKQASILTGAKLILI---AAIIYCFAWAFGVIGVWVSLATCST 431
             GL +V    F     ++  + +    L LI    A +    + FG  G+++++A C +
Sbjct: 385 FFGLGMVMVQAFNGAGDTRTPAAINVVVLWLIEIPLAYLLALYFHFGATGIFIAIAFCHS 444

Query: 432 MLVI---WMF 438
              +   W+F
Sbjct: 445 FHALVSGWLF 454