Pairwise Alignments

Query, 448 a.a., MATE efflux family protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 469 a.a., MATE family efflux transporter from Dickeya dianthicola ME23

 Score = 95.1 bits (235), Expect = 4e-24
 Identities = 101/407 (24%), Positives = 184/407 (45%), Gaps = 19/407 (4%)

Query: 13  LLQEPIAKLFWRYTIPTIASMLVTGVYVTIDGIFVGHYLGETGLAGMMLAYPVGAILYAI 72
           +L  PI  +  R  +PTIA ++V  +   ++  FV   LG   LAG+ + +PV  ++  +
Sbjct: 24  ILVGPILPVMLRLALPTIAVLVVQALVGVVETYFVSS-LGADVLAGVAVVFPVLMLMQMM 82

Query: 73  G-AMIGMGSAALVSINLGQGNVAKARKLLGNAFSLCLLAGAFFALVGGVFSRDILIALGA 131
               IG G ++ +S   G G    A+ L+ +   +  + GA FA +  +    +   +G 
Sbjct: 83  ANGGIGGGLSSAISRASGAGRWQDAQALVWHGVIIAGVLGAAFAAIILIGGEALYHVMGV 142

Query: 132 EGEILENANEYLFWYFALCHFPIISMAFTTLLRNDGRPSMVTFVLILGGVLNTFLDWLFI 191
           +G  L  A  Y    FA      +    +  LR  G       + +LGGV+   L  + I
Sbjct: 143 KGPSLSAALAYSNLVFAGAPLVWLVALLSAALRGAGDTKTPARITLLGGVILLPLSPVLI 202

Query: 192 V----VFPFGLAGAAIATMLSQAVTGLLCLQHFFGARTQLKINLEQMKLKLDNCINIARV 247
           +    +  FG+AGA IA +L      LL ++H   A + +++++  +  +L    ++  V
Sbjct: 203 LGWGPIPSFGVAGAGIAILLYYLFATLLLVRHMRSANSVIRLSIAPLSSRLFK--DVLGV 260

Query: 248 GLPSFLMNLYLSIVLTLHNTAFLWVGGPLHVAAYGVVSYTEAFFYLIFEGIALGTQPIYS 307
           G  S +  + +++ +T+  TA + + GP  +A YG+ S  +     +  G+      +  
Sbjct: 261 GFLSAIGTVQINLTVTV-VTAVVGLFGPDAIAGYGIASRLDYLQIPLLFGLGTAIMTMVG 319

Query: 308 FNAGAGRFDRVKQARNIAFSMTL-LTAALGL-VLIYSRPEWLVYLFAGDNPSLTPVAIEG 365
            N GAG+  R ++   +  ++    T  +GL   +Y R  WL  LF+ D+  L      G
Sbjct: 320 VNIGAGQKQRAQRIAWVGAAVAFTFTELIGLGAAVYPR-LWL-SLFSDDHVILA----AG 373

Query: 366 MRWYFWGLPMEGLILVGASFFQAINCSKQA--SILTGAKLILIAAII 410
            R+     P  G I +G + + A   +K+    +L G   + IAA +
Sbjct: 374 TRYLQNVAPFYGAIGIGMALYFAGQGAKRVLWPVLAGTVRMAIAAFV 420