Pairwise Alignments

Query, 448 a.a., MATE efflux family protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 463 a.a., putative efflux protein, MATE family from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 92.4 bits (228), Expect = 3e-23
 Identities = 103/431 (23%), Positives = 185/431 (42%), Gaps = 38/431 (8%)

Query: 18  IAKLFWRYTIPTIASMLVTGVYVTIDGIFVGHYLGETGLAGMMLAYPVGAILYAIGAMIG 77
           I K  +  +IP I  ML+  ++  +D  FVG  LG   +A + L   V  I+Y++   + 
Sbjct: 26  IRKAIFYLSIPMILEMLMESLFAVVDIFFVGK-LGVQAVATVGLTESVLTIVYSVAIGLS 84

Query: 78  MGSAALVSINLGQGNVAKARKLLGNAFSLCLLAGAFFALVGGVFSRDILIALGAEGEILE 137
           M + A+V+  +G+     A +    A  +C +      ++G  F++D+L  +G +  ++ 
Sbjct: 85  MAATAVVARRIGEKKKKAASQAAFQAIIICAVLAMTIGVLGLFFAKDLLTLMGGDPALVA 144

Query: 138 NANEYLFWYFALCHFPIISMAFTTLLRNDGRPSMVTFVLILGGVLNTFLDWLFIV---VF 194
           +   Y    FA     ++      + R  G   +    L L   +N  LD + I     F
Sbjct: 145 SGFGYTQVIFAGNISVMLLFLINGVFRGAGNAVIAMRTLWLANGINIVLDPMLIFGIGFF 204

Query: 195 P-FGLAGAAIATMLSQAVTGLLCLQHFFGARTQLKINLEQMKLK---LDNCINIARVGLP 250
           P  GL GAA AT + ++V  L  L   F  +  +  N + ++ +   + N + IA  G+ 
Sbjct: 205 PELGLEGAAWATTIGRSVGVLFQLSVLFRGKAIISFNWDVLRFRWYTVKNILKIAIGGMG 264

Query: 251 SFLMNLYLSIVLTLHNTAFLWVGGPLHVAAYGVVSYTEAFFYLIFEGIALGTQPIYSFNA 310
            FL+     IVL       +   G + +A + +      F  L   G +  +  +   N 
Sbjct: 265 QFLIESASWIVL----MRIVSNSGSVALAGFTIAIRLIIFALLPAMGFSNASATLVGQNL 320

Query: 311 GAGRFDRVKQ-ARNIAFSMTLLTAALGLVLIYSRPEWLVYLFAGDNPSLTPVAIEGMRWY 369
           GA R DR +Q A   A    L   ++GL L +   E+++  F  DNP +  V  +G+   
Sbjct: 321 GAKRPDRAEQSAWKAAHYTALFLGSIGL-LFFFFGEYIISWF-NDNPEVIQVGTDGL--- 375

Query: 370 FWGLPMEGLILVGASFF-------QAINCSKQASILTGAKLILI------AAIIYCFAWA 416
                  G+I +G  FF       Q++N +      T   ++++       A +    + 
Sbjct: 376 -------GIICLGYVFFAYGMVMSQSLNGAGDTKTPTLINIVVLWLFQLPLAYVLSQWFD 428

Query: 417 FGVIGVWVSLA 427
            G IGV++++A
Sbjct: 429 MGEIGVFIAIA 439