Pairwise Alignments

Query, 448 a.a., MATE efflux family protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 456 a.a., putative efflux protein, MATE family from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 98.6 bits (244), Expect = 4e-25
 Identities = 77/336 (22%), Positives = 157/336 (46%), Gaps = 6/336 (1%)

Query: 27  IPTIASMLVTGVYVTIDGIFVGHYLGETGLAGMMLAYPVGAILYAIGAMIGMGSAALVSI 86
           +P I + ++   Y  ID  ++G  LG   +A + +++P+  ++ ++GA + +    LVS 
Sbjct: 23  LPIILANVLQTAYQLIDTFWLGR-LGANAVAAVSVSFPILFLILSLGAGLTLAGTVLVSQ 81

Query: 87  NLGQGNVAKARKLLGNAFSLCLLAGAFFALVGGVFSRDILIALGAEGEILENANEYLFWY 146
           + G  N             +        A+VG   +  ++  +GA  EI  ++ +Y    
Sbjct: 82  HKGANNQKMVNSASSQTVFVVFCISVLLAIVGYFAAGPLMKLIGAGPEIYSDSVDYFKVS 141

Query: 147 FALCHFPIISMAFTTLLRNDGRPSMVTFVLILGGVLNTFLDWLFIVVFP----FGLAGAA 202
                F  +   F +L+R  G   +  +V+++  +LN  LD LFI  F     FG+AGAA
Sbjct: 142 SLGFVFLFMFFVFQSLMRGIGNVMLPVYVVLVTVLLNLVLDPLFIYGFGPVPGFGVAGAA 201

Query: 203 IATMLSQAVTGLLCLQHFFGARTQLKINLEQMKLKLDNCINIARVGLPSFLMNLYLSIVL 262
           +A++++Q ++ +  +   +  +  ++I+  +MK  L     + ++GLPS +     ++ +
Sbjct: 202 VASVITQGLSAIAGIYVMWKGKHGIQIHFSEMKWDLPWAKKLFQLGLPSSMEQSARALGM 261

Query: 263 TLHNTAFLWVGGPLHVAAYGVVSYTEAFFYLIFEGIALGTQPIYSFNAGAGRFDRVKQAR 322
           T+     +   G   VAAYGV +   +F  +   G+A+ T  +   N GA +  R ++  
Sbjct: 262 TM-MVVLVTSFGSETVAAYGVGARMLSFVIVPALGLAIATTTLVGQNVGARKLKRAEKTG 320

Query: 323 NIAFSMTLLTAALGLVLIYSRPEWLVYLFAGDNPSL 358
            ++  +  +      +L++   E LV  F  + P +
Sbjct: 321 FLSIKVAFIGLTAIGILLFVFAEDLVRFFVPNEPKV 356