Pairwise Alignments

Query, 514 a.a., transporter, putative (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 454 a.a., Putative transport protein from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score = 50.8 bits (120), Expect = 1e-10
 Identities = 79/363 (21%), Positives = 131/363 (36%), Gaps = 59/363 (16%)

Query: 66  GISLSDYGIIISLWAIMQTFVPVFTGGISDRVGYKETIFGSTIIKIMGYLTMAFFPTFWG 125
           G S +  GI I ++ + Q    +  G +SDR+G K  I G   + + G +  A   + WG
Sbjct: 44  GASEALIGIAIGIYGLAQAIFQIPFGLLSDRIGRKPLIVGGLAVFVAGSVIAALSHSIWG 103

Query: 126 FLSGSLLLAIGTGIFKPGIQGTLVLSTNRNNTSMA-------WGIFYQVVNIGGFLGPLV 178
            + G  L   G+G     +   L   T   N + A       +GI + +  +   LGP+V
Sbjct: 104 IILGRALQ--GSGAIAAAVMALLSDLTREQNRTKAMAFIGVSFGITFAIAMV---LGPIV 158

Query: 179 AVHMRQLSWDNVFYACAAIISLNFLFLLTYTEPGKAERLARNQQIKSGDIKQETLWRDAW 238
                 L  + +F+  AA+ +L  L  +          L R   +  G    + L     
Sbjct: 159 T---HSLGLNALFWMIAALATLGILLTIWVVPNSTNHVLNRESGMVKGSF-SKVLAEPRL 214

Query: 239 HELKKPIVIYYMLVFSGFWFLFNSLFDV---LPIHISEWVDTSVIVTSLFGSEGTSNGIL 295
            +L   I+  ++L+ S F  L   L D       H   ++ T VI  +            
Sbjct: 215 LKLNFGIMCLHILLMSTFVALPGQLADAGFPAAEHWKVYLATMVIAFA------------ 262

Query: 296 QFWLGLNNEGTKVMPEGMLNLNAGLIMTSCFLVAALTAKYRITTVMLIGCLLSILA-FVF 354
                       V+P               F++ A   K R+  V L    L ++A  V 
Sbjct: 263 -----------AVVP---------------FIIYA-EVKRRMKQVFLFCVGLIVVAEIVL 295

Query: 355 IGAFHAAWFIVFAIAMFSIGEMMISPKKNEFMGNIAPEGKKAMYLGFVMLPQGIGWGLEG 414
            GA    W +V  + +F +   ++       +   +P G K   +G     Q +G  L G
Sbjct: 296 WGAGQHFWELVIGVQLFFLAFNLMEALLPSLISKESPAGYKGTAMGVYSTSQFLGVALGG 355

Query: 415 YFG 417
             G
Sbjct: 356 SLG 358