Pairwise Alignments

Query, 365 a.a., cobalamin synthesis protein/P47K family protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 325 a.a., GTP-binding protein from Dickeya dianthicola ME23

 Score =  211 bits (536), Expect = 3e-59
 Identities = 130/353 (36%), Positives = 197/353 (55%), Gaps = 39/353 (11%)

Query: 9   NIITGFLGVGKTSLIKQLLKTKPEGETWAVLVNEFGEVGIDACLLAANNSGVQIREVAGG 68
           N+ITGFLG GKT+ I+ LL  KPE E WAVLVNEFGE+GID  LL+  ++G  ++E+ GG
Sbjct: 6   NLITGFLGSGKTTTIRHLLSHKPEDEIWAVLVNEFGEIGIDGALLS--DTGALLKEIPGG 63

Query: 69  CMCCAAGVPTQVAINQLIARAKPDRLLIEPTGLGHPNEIIKVLSAPHYQHVIRLQSTLCL 128
           CMCC  G+P QV +N L+ + KP RLLIEPTGLGHP +I+ +L++  YQ  ++LQ+TLCL
Sbjct: 64  CMCCVNGLPMQVGLNMLLQK-KPHRLLIEPTGLGHPKQILTLLTSEAYQPWLQLQATLCL 122

Query: 129 IDARKLMDERYRGHDNFIQQLQVADVIITTKTDLYPEFEALHDQQLDLELAQYLNALQLV 188
           +DAR+L D RY  ++NF  QL  ADVI+  K D +        Q  D +  Q     Q  
Sbjct: 123 LDARQLGDSRYTENENFRDQLAAADVIVANKEDTW--------QDSDRDALQAWYQQQSQ 174

Query: 189 DTPVVEHSASQGLSTRLLEYLKQPRRDIPRAPSYKAASVVSQPQSLLLNSAETLGLQGVF 248
           D  ++  +  Q L T +L+  ++    +P A  +  A+               L L G  
Sbjct: 175 DRRLITLAQGQ-LDTAVLDLPRENHHVLPDARHHPHATAAK-------TGLAALKLTG-- 224

Query: 249 AKSVSEDGDYIEPQERVRKQNQGEGCFSCGWVFNPLQEFDFDKLMQFISEQTQVNPTLLR 308
                        +   R  NQG+G ++CGW+F+   +F+   L+ ++    ++ P + R
Sbjct: 225 ------------RESWRRALNQGQGYYACGWIFDGDTQFNTASLLDWV----RLAP-VSR 267

Query: 309 VKAVMITSDGIAGINWSDGDMAV-TELDDSLDSRLEMIATQDLDWDRIEQALV 360
           VK VM   +G   +N    D+ + T+     DSR+E+I   + +W+ +++ L+
Sbjct: 268 VKGVMRIPEGTLVVNRQGFDLRIETQSASPPDSRIEIINDSEAEWNTLQKQLL 320