Pairwise Alignments

Query, 998 a.a., sensory box protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 802 a.a., bifunctional diguanylate cyclase/phosphodiesterase from Magnetospirillum magneticum AMB-1

 Score =  423 bits (1088), Expect = e-122
 Identities = 268/776 (34%), Positives = 426/776 (54%), Gaps = 18/776 (2%)

Query: 220 VNPRLCQMLKYSEDELLHMTWKQLTHPDDLDADVAKFEQMLAGNIDNYELDKRFIAKNGS 279
           VN R CQ+   + ++ +  + ++    DD   +V + +   AG I   + D +F   +GS
Sbjct: 34  VNRRFCQITGMTPEQCIGHSARRHFADDDQRLEVVR-QLKEAGEIA--DADVKFFRVDGS 90

Query: 280 LVYTHMTVACKRTNHQVLLVISGYLDVTAQTLADREVLASREQLELVLSSSDLGVWDWDI 339
             ++ +T+     N + + +   Y DV+ +  A++ +L  +  +  +L SS  G+   + 
Sbjct: 91  SFWSVLTIRSATLNGEAVNLAWLY-DVSKRKQAEQAILDGKTLIRAMLDSSTDGIVLVNA 149

Query: 340 RNDHIERNTRSADILGCDIDMLNANS--RQWMDSIVAEDRPQVLQSIEAHIRGETPQHKM 397
               +  N  ++ I   + D L   +      DS+VA  R  + + ++   R ET +   
Sbjct: 150 EGTILAVNAAASAIFEKNSDDLPGKAIWDHLPDSVVAPMRRGIDRVLD---RRETVESHH 206

Query: 398 EYRLKTLNRDIRWILDTGKVVSRDANNNALRMCGTYTDITEAKLIEESLKLSALVYDNSS 457
               K  +  +  + D+  V  RD      R+     D+T++    + L+      + + 
Sbjct: 207 AIGAKLFDVHMHLVADS--VGQRD------RVAIFSRDVTQSHQRRQQLRKLETALEQAP 258

Query: 458 EAMSVLDENGVIITVNAAFTDITGYSESEIRGQHIRMMYCDLNGHEFYQQMNDDIRNKGE 517
            ++ + D +G I  VN AF  ++GYSE E+ G++ R++         Y+ M   + +   
Sbjct: 259 VSVMITDSHGAIEYVNRAFVLVSGYSEDEVLGRNPRLLKSGETVASLYRDMWHCLASGAT 318

Query: 518 WQGEMRQRRRNNEEYVIWLTINTIKDKDGLPHRRVALFSDITDKKQSEHLIWKQANYDTL 577
           WQGE+  R ++   +  + TI+ I+D DG+    +A+  +IT +K++E  +  QA +DTL
Sbjct: 319 WQGELCNRAKDGSLFWEYATISPIRDDDGVVTHFMAVKENITQRKETEQQLVHQATHDTL 378

Query: 578 TGLPNRRMLLEYLSAEIKTADRNRNHFALMFLDLDYFKEVNDTLGHAMGDLLLIETASRL 637
           TGLPNR +L + +   I+ A R      LMFLDLD FK VND+LGH  GD LL   + RL
Sbjct: 379 TGLPNRLLLEDRVHHAIEVAKREGRRIGLMFLDLDRFKIVNDSLGHVAGDELLKVVSDRL 438

Query: 638 KSCVRDADVVARLGGDEFTVVLSSMADHKGIERVAEHILRRIAEPYYLGEETTHISASIG 697
           +  +R +D VARLGGDEF VVL+       +  VAE I   + EP  L     H+ ASIG
Sbjct: 439 RHTLRRSDTVARLGGDEFVVVLTHFQSTTELAEVAEKISAALDEPVELSGHKVHVGASIG 498

Query: 698 ITLYPDDSPSIEGLLKHADQAMYAAKDQGRNRFNYFTPSMQEYAKYRMRLIHDLRQAVLN 757
           I +YPDD  +   L+K AD AMY AK +GRN F ++  +M + A  R++L   LR+A++ 
Sbjct: 499 IAIYPDDGDNFNALMKDADTAMYRAKQKGRNTFCFYDSNMNDEALDRLKLEEALRRALVR 558

Query: 758 KEFELHYQPIVTMATGEVLKAEALLRWFHPERGSVSPAEFIPVAEDTGLIVEIGNWVFEQ 817
            EF+L YQP V + TG     EAL+RW  PERG VSPA FIPVAE++ LI  IG WV E+
Sbjct: 559 GEFQLFYQPQVDLQTGRTSGVEALIRWNSPERGQVSPALFIPVAEESNLISMIGWWVLEE 618

Query: 818 AARQSAQWRKTLGVEIQISVNKSPIQFRDEGALLHNWLELLQQLDVTGAGVCVEITEGLL 877
           + RQ A WR+     I+++VN S  QF +  AL+    +L+ Q  V  + + +E+TE  +
Sbjct: 619 SCRQIAAWREAGLTGIKVAVNVSGRQFLNH-ALVECISDLMAQYAVLPSQLEIELTESTV 677

Query: 878 LDASMGVTEKLLAYRDAGVQVSLDDFGTGYSSLAYLKKFDIDYLKIDQSFTRNIDTDEND 937
           +       E+L   R+ G+QVS+DDFGTGYSSL+YLK+  +  +K+D+SF R+++   ++
Sbjct: 678 MAEPDRAIEQLTRLREIGIQVSVDDFGTGYSSLSYLKRLPLSTIKVDRSFVRDVNNQSDN 737

Query: 938 HTLCEAIIVMAHKLGMKVIAEGVETEAQRQVLLRAGCDYGQGYLFSKPVSASEFAS 993
             +  AI+ +A  L M ++AEGVETE + Q L  AGC   QG+ ++KP+ A + A+
Sbjct: 738 AAIVSAILGLADALDMSIVAEGVETEGEEQHLKDAGCIKVQGFRYAKPMPADQLAA 793