Pairwise Alignments

Query, 998 a.a., sensory box protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 831 a.a., DUF3365 domain-containing protein from Magnetospirillum magneticum AMB-1

 Score =  421 bits (1081), Expect = e-121
 Identities = 231/556 (41%), Positives = 338/556 (60%), Gaps = 4/556 (0%)

Query: 436 ITEAKLIEESLKLSALVYDNSSEAMSVLDENGVIITVNAAFTDITGYSESEIRGQHIRMM 495
           +TE  L +E  +L+A V+ N+ EA  + D  G I+ +N  FT++TGY E+E+ G + R++
Sbjct: 262 LTEKALADEETRLAAHVFSNALEATLITDPKGRILRINPMFTELTGYGEAEVVGGNPRII 321

Query: 496 YCDLNGHEFYQQMNDDIRNKGEWQGEMRQRRRNNEEYVIWLTINTIKDKDGLPHRRVALF 555
             + +  +FY ++   I   G WQGE+  RR++ + +V W +I  + D+ G     +  F
Sbjct: 322 RSNHHDADFYAEIWQAIFRDGRWQGEIWNRRKDGQVFVAWESIVAVYDEAGAIRYFIGSF 381

Query: 556 SDITDKKQSEHLIWKQANYDTLTGLPNRRMLLEYLSAEIKTADRNRNHFALMFLDLDYFK 615
            DIT++ +++  I + A+YD LT LPNR +  + L   +  A R+    AL+FLDLD FK
Sbjct: 382 RDITEQVEAQRHILRLAHYDVLTDLPNRVLFQDRLERAVVHALRHDRQAALLFLDLDGFK 441

Query: 616 EVNDTLGHAMGDLLLIETASRLKSCVRDADVVARLGGDEFTVVLSSMADHKGIERVAEHI 675
           +VNDT+GH  GD LL E A RL+ CVR  D +ARLGGDEFTV+L  ++       VA+ I
Sbjct: 442 KVNDTMGHRAGDDLLKEVAVRLRGCVRMTDTIARLGGDEFTVILDEISAANDASMVADKI 501

Query: 676 LRRIAEPYYLGEETTHISASIGITLYPDDSPSIEGLLKHADQAMYAAKDQGRNRFNYFTP 735
           L  +  P ++      I  SIGI+L+P D  S + LLKHAD AMY AK  G+ RFN+++ 
Sbjct: 502 LASLHAPIFIDGRDVFIGTSIGISLFPIDGTSGDELLKHADTAMYQAKAAGKGRFNFYSA 561

Query: 736 SMQEYAKYRMRLIHDLRQAVLNKEFELHYQPIVTMATGEVLKAEALLRWFHPERGSVSPA 795
            M +  ++R+ L   LRQAV   +F++HYQP   +AT  V   EAL+RW HP  G +SP 
Sbjct: 562 EMTKREEHRLELETALRQAVEEGQFQVHYQPQKNLATNRVSGFEALVRWQHPRLGMISPV 621

Query: 796 EFIPVAEDTGLIVEIGNWVFEQAARQSAQWRKTLGVEIQISVNKSPIQF-RDEGALLHNW 854
           +FIP+AE+  LI  I  +V  QA R+  QWR   G +I ++VN S + F RD+  L    
Sbjct: 622 DFIPLAEEMHLIDRIDMFVMRQACRKGRQWRDQ-GYDICMAVNLSGVNFSRDD--LPEQV 678

Query: 855 LELLQQLDVTGAGVCVEITEGLLLDASMGVTEKLLAYRDAGVQVSLDDFGTGYSSLAYLK 914
            ++L+        + +EITE  ++D  +   E L   R  GV++++DDFGTGYSSL+YLK
Sbjct: 679 RQVLEDTGFPAENLELEITESFVIDLEVDQREVLQRLRALGVKLAIDDFGTGYSSLSYLK 738

Query: 915 KFDIDYLKIDQSFTRNIDTDENDHTLCEAIIVMAHKLGMKVIAEGVETEAQRQVLLRAGC 974
           +  ++ LKID+SF R+I  D  D  L  +II +AH LG+KV+AEG+E   Q  +LL   C
Sbjct: 739 RLPVNTLKIDRSFVRDIARDSRDMMLVSSIIGIAHSLGLKVVAEGIEERDQLAILLSQEC 798

Query: 975 DYGQGYLFSKPVSASE 990
           D  QGYL +KP+ A +
Sbjct: 799 DEIQGYLIAKPMPAEQ 814