Pairwise Alignments

Query, 998 a.a., sensory box protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 880 a.a., CBS domain-containing protein from Magnetospirillum magneticum AMB-1

 Score =  417 bits (1071), Expect = e-120
 Identities = 227/557 (40%), Positives = 331/557 (59%), Gaps = 6/557 (1%)

Query: 444 ESLKLSALVYDNSSEAMSVLDENGVIITVNAAFTDITGYSESEIRGQHIRMMYCDLNGHE 503
           + L L+  V + S + + ++D    I  VN AFT +TGY+  EI G++  ++    +   
Sbjct: 314 KDLNLARKVIEASLDGIMIVDSTQKIEFVNPAFTHMTGYTAEEIIGKNPNVLKSGHHDET 373

Query: 504 FYQQMNDDIRNKGEWQGEMRQRRRNNEEYVIWLTINTIKDKDGLPHRRVALFSDITDKKQ 563
           FY+ M   +  +  WQGE+  RR+N E Y  WLTIN I+D  G   +  A+FSDIT++K+
Sbjct: 374 FYKHMYTVLEAQDYWQGEIWNRRKNGEIYPEWLTINVIRDDTGDITQYAAIFSDITERKK 433

Query: 564 SEHLIWKQANYDTLTGLPNRRMLLEYLSAEIKTADRNRNHFALMFLDLDYFKEVNDTLGH 623
           +E  I   A +D LT LPNRR+  + L   I  A R+    A+MFLDLD FK +ND+LGH
Sbjct: 434 TEERIKNLAYFDVLTALPNRRLFTDRLQIAIANAHRHGQQLAIMFLDLDLFKRINDSLGH 493

Query: 624 AMGDLLLIETASRLKSCVRDADVVARLGGDEFTVVLSSMADHKGIERVAEHILRRIAEPY 683
            +GD +L+ETA+R+  CVR+ D VARLGGDEFTV+L  +   + + ++AE ++  + +P+
Sbjct: 494 GVGDQVLVETAARISHCVREGDTVARLGGDEFTVLLPELDHLEDVAKLAERVIAHVKQPF 553

Query: 684 YLGEETTHISASIGITLYPDDSPSIEGLLKHADQAMYAAKDQGRNRFNYFTPSMQEYAKY 743
            + +   +++ SIGI +YP+D  ++E L+K+AD AMY AKD GRN +  +T +M   +  
Sbjct: 554 LVDDNELYVTTSIGIAVYPEDGTTVEALIKNADTAMYRAKDLGRNSYQLYTAAMNARSFE 613

Query: 744 RMRLIHDLRQAVLNKEFELHYQPIVTMATGEVLKAEALLRWFHPERGSVSPAEFIPVAED 803
           R+ +   LR A+  +EF L YQ  V    G +   EAL+RW HPE G VSP +FIP+AE 
Sbjct: 614 RLTMESSLRHALTREEFRLVYQVKVDSEDGRMSGVEALVRWHHPEMGLVSPVDFIPLAEA 673

Query: 804 TGLIVEIGNWVFEQAARQSAQWRKTLGVEIQISVNKSPIQFRDEGALLHNWLELLQQLDV 863
            G+I +IG WV   A RQ   W       ++I+VN S  QF  E  +       L++  +
Sbjct: 674 MGVISDIGEWVLRTACRQCKHWMDLGLPPVRIAVNVSAQQF-VETDVPEVVARALRETGL 732

Query: 864 TGAGVCVEITEGLLLDASMGVTEKLLAYRDAGVQVSLDDFGTGYSSLAYLKKFDIDYLKI 923
               + +E+TE +L+     V   L + R  GV++S+DDFGTGYSSL+YLK+  ID LK+
Sbjct: 733 PPQYLELELTETVLMQRVDEVVAVLKSLRAMGVRISIDDFGTGYSSLSYLKRMPIDALKV 792

Query: 924 DQSFTRNI-----DTDENDHTLCEAIIVMAHKLGMKVIAEGVETEAQRQVLLRAGCDYGQ 978
           D+SF  +I        E+   +   II +AH L +K IAEGVET  Q + L   GCD  Q
Sbjct: 793 DRSFVNDIFDGQSKVTEDGAEIVSTIINLAHNLKLKAIAEGVETPEQAEFLRSKGCDEVQ 852

Query: 979 GYLFSKPVSASEFASKY 995
           GYL S+PVS  +  S +
Sbjct: 853 GYLISRPVSGEDLISLF 869