Pairwise Alignments

Query, 226 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 213 a.a., helix-turn-helix transcriptional regulator from Paraburkholderia sabiae LMG 24235

 Score = 77.0 bits (188), Expect = 3e-19
 Identities = 50/212 (23%), Positives = 100/212 (47%), Gaps = 10/212 (4%)

Query: 1   MKLQELTQSDLDILKSIENIVDGIAAMYGEHTEVVLHSLDAKHPSVIKIANGHVTGREVG 60
           MK   L +    ++  ++ + DG+   +    EVV+H L     +++ I N +++GR VG
Sbjct: 4   MKKSALEREQASLIDQVKQMADGLGQTFAPFCEVVVHDLRDPRHAILAIHN-NLSGRAVG 62

Query: 61  APITNLALLKLKTGQ--DISNSYLTKCANGKTLRSITTVIRNPKNLPIGLLCINTDMDA- 117
            P T L L ++       +  +Y  +  +G+  +S +  I++     I  LC+N D++  
Sbjct: 63  DPATELGLARIADDDYPQLLTNYPNQFGDGRRAKSTSIGIKDSTGRYIAALCVNVDLNLF 122

Query: 118 -PLQSVLRTMMPEQLLGSELTSSPEVFARNIDEALHSTIDSVNHEIRANPAISASQKSRE 176
             +Q++L        +G++ T  P        EAL   ID     +   P    +++ R 
Sbjct: 123 RGIQNMLEQFCTASGVGAKETLDPANA-----EALRERIDQYAISLATTPQALKTEQRRA 177

Query: 177 IVNQLHELGIFELKDSAQVAATRLGISVHSIY 208
           ++ +L + G  E++ S ++ A  LG+S  ++Y
Sbjct: 178 LMQELKQAGFLEVRRSMEIIAAHLGVSRATVY 209