Pairwise Alignments

Query, 226 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 214 a.a., PAS domain-containing protein from Paraburkholderia sabiae LMG 24235

 Score = 63.9 bits (154), Expect = 2e-15
 Identities = 52/197 (26%), Positives = 103/197 (52%), Gaps = 7/197 (3%)

Query: 20  IVDGIAAMYGEHTEVVLHSLDAKHPSVIKIANGHVTGREVGAPITNLALLKLKTGQDISN 79
           I DGIAA++  + EVV+H L  +  +V+ +AN +++ RE+G   + L   +    + +  
Sbjct: 20  IADGIAALFFPYAEVVIHDLHDQ--TVLYLAN-NLSKREIGDD-SALEETEHSARERVIG 75

Query: 80  SYLTKCANGKTLRSITTVIRNPKNLPIGLLCINTDMDAPLQSVLRTMMPEQLLGSELTSS 139
            Y     +G+ +R ++ V+ +    P G+LCIN ++ A  + V R+ +   + G+ + + 
Sbjct: 76  PYEKLNWDGRRMRCVSNVLFDDNGQPAGMLCINFNI-AVFEDV-RSTLDLFIKGAGVVAQ 133

Query: 140 PE-VFARNIDEALHSTIDSVNHEIRANPAISASQKSREIVNQLHELGIFELKDSAQVAAT 198
           PE +F  +  E +++ +     E +        +  RE+V  L+  G F  K SA   A 
Sbjct: 134 PEELFRDDWQERINTFLHGWLRERQIGLNGLTREHRRELVEALYAEGAFRGKSSANYVAN 193

Query: 199 RLGISVHSIYRYLREIK 215
            LG+   ++Y++L+++K
Sbjct: 194 VLGMGRATVYKHLKQMK 210