Pairwise Alignments

Query, 226 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 242 a.a., transcriptional regulator from Serratia liquefaciens MT49

 Score =  165 bits (418), Expect = 6e-46
 Identities = 86/214 (40%), Positives = 138/214 (64%), Gaps = 7/214 (3%)

Query: 7   TQSDLDILKSIENIVDGIAAMYGEHTEVVLHSLDAKHPSVIKIANGHVTGREVGAPITNL 66
           TQ+D +ILKS E +VDG+A + G H E+VLH+L+    S ++IANG  TGR++G+PIT+L
Sbjct: 22  TQTDHEILKSYEAVVDGLAMLIGGHCEIVLHALEDLKCSAVRIANGEHTGRQIGSPITDL 81

Query: 67  ALLKL--KTGQD--ISNSYLTKCANGKTLRSITTVIRNPKNLPIGLLCINTDMDAPLQSV 122
           AL  L    G D  +S +Y T+  +G  ++S+T  IRN +   IGLLCIN ++D P   V
Sbjct: 82  ALRMLHDMAGDDSSVSKAYFTRAKSGVLMKSVTIAIRNREQRVIGLLCINMNLDVPFSQV 141

Query: 123 LRTMMPEQLLGSELTSSPEVFARNIDEALHSTIDSVNHEIRANPAISASQKSREIVNQLH 182
           ++T MP +   ++  +    FA ++D+ +  T++    E+ A+  +S + K+R++V  L+
Sbjct: 142 MQTFMPPE---TQDVAPSVNFASSVDDLVAQTLEFTIEEVNADRNVSNNAKNRQVVLNLY 198

Query: 183 ELGIFELKDSAQVAATRLGISVHSIYRYLREIKA 216
           E GIF++KD+    A RL IS H++Y Y+R+ K+
Sbjct: 199 EKGIFDIKDAINQVADRLNISKHTVYLYIRQFKS 232