Pairwise Alignments
Query, 524 a.a., hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1
Subject, 480 a.a., hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1
Score = 129 bits (324), Expect = 2e-34
Identities = 107/371 (28%), Positives = 155/371 (41%), Gaps = 61/371 (16%)
Query: 76 MPAHLAQVSQIYSNLSAFAALKQDGTVVAWGDPDCGGDINNAAEPLVNVKQLYAAENTCG 135
+P L V + +N SAFAAL Q G V+ WGD GGD E L VKQ+ ++ G
Sbjct: 62 IPCDLPAVETVVTNSSAFAALTQSGEVITWGDSYAGGDSREVTEQLKQVKQIVPVKD--G 119
Query: 136 FAALTRDDKLIPWGMGMKQVLTGVRSFVLAEGLYAAIKQDGSVVSWSNLDSTPAELSSGQ 195
FAAL +D G+VV W N + S +
Sbjct: 120 FAALRQD---------------------------------GTVVYWGN----AGKYSLDK 142
Query: 196 YAAPAMTNIDTVLINKGAFAALKQGGAVVTWGDAAYGGDSRHVASELNHVDLLYANNNAF 255
MTNI + N+ A AAL G V TWG YGG+S HV +L V ++A +F
Sbjct: 143 ALQNRMTNITKLFANQEAIAALDANGKVHTWGYGPYGGNSLHVQDQLVDVVDIFARGRSF 202
Query: 256 TARTATGKLVSWGGLSDDQKGREQLAKLNQLAPAVKVVNTEHGFAALLADGSVYAWGEGE 315
A G V WG + + ++ L +L +A K+ +H +AAL DG+V +WG
Sbjct: 203 VALKKEGSAVIWGQVEESTNMKKLLPQLTDVA---KIEYFQHTYAALKKDGTVVSWGWRS 259
Query: 316 LTEYHVAFPARLSTTNRTNKVIDIYANRGAFAALTISRQLYVWGSKFNGADTSVLQNKLQ 375
S + V+ + AN AFA L+ + + WG N + + +
Sbjct: 260 ---------DAYSIRSALKDVVSMTANNCAFAILSPTGDAHFWGDGINCGVDWIKKTDIT 310
Query: 376 DVQKVYPFEEGFVALR--------RDNTAIAWEGWELVGKQPRYQEVTQVNKVVTY-ERE 426
V+++ GF+ LR D+T A+ + Q + Q V+T
Sbjct: 311 GVKEIISIGSGFLLLRDKAVPQIVADDTDYAYM-FGFHDAQEILDKYWQEGSVITRGPAS 369
Query: 427 FAFLKQDGTVV 437
F F + DG VV
Sbjct: 370 FVFTRPDGKVV 380
Score = 110 bits (276), Expect = 9e-29
Identities = 82/271 (30%), Positives = 116/271 (42%), Gaps = 23/271 (8%)
Query: 204 IDTVLINKGAFAALKQGGAVVTWGDAAYGGDSRHVASELNHVDLLYANNNAFTARTATGK 263
++TV+ N AFAAL Q G V+TWGD+ GGDSR V +L V + + F A G
Sbjct: 69 VETVVTNSSAFAALTQSGEVITWGDSYAGGDSREVTEQLKQVKQIVPVKDGFAALRQDGT 128
Query: 264 LVSWGGLSDDQKGREQLAKL--NQLAPAVKVVNTEHGFAALLADGSVYAWGEGELTEYHV 321
+V WG G+ L K N++ K+ + AAL A+G V+ WG G
Sbjct: 129 VVYWG-----NAGKYSLDKALQNRMTNITKLFANQEAIAALDANGKVHTWGYGPYG---- 179
Query: 322 AFPARLSTTNRTNKVIDIYANRGAFAALTISRQLYVWGSKFNGADTSVLQNKLQDVQKVY 381
L ++ V+DI+A +F AL +WG + L +L DV K+
Sbjct: 180 --GNSLHVQDQLVDVVDIFARGRSFVALKKEGSAVIWGQVEESTNMKKLLPQLTDVAKIE 237
Query: 382 PFEEGFVALRRDNTAIAWEGWELVGKQPRYQEVTQVNKVVTYEREFAFLKQDGTVVDGHS 441
F+ + AL++D T ++W GW R + V + FA L G
Sbjct: 238 YFQHTYAALKKDGTVVSW-GWRSDAYSIR-SALKDVVSMTANNCAFAILSPTGDAHFWGD 295
Query: 442 G--------PKTKITQATDIFPTGLGFTAKR 464
G KT IT +I G GF R
Sbjct: 296 GINCGVDWIKKTDITGVKEIISIGSGFLLLR 326
Score = 102 bits (255), Expect = 2e-26
Identities = 60/203 (29%), Positives = 107/203 (52%), Gaps = 10/203 (4%)
Query: 236 RHVASELNHVDLLYANNNAFTARTATGKLVSWGGLSDDQKGREQLAKLNQLAPAVKVVNT 295
RH+ +L V+ + N++AF A T +G++++WG D G + QL ++V
Sbjct: 60 RHIPCDLPAVETVVTNSSAFAALTQSGEVITWG---DSYAGGDSREVTEQLKQVKQIVPV 116
Query: 296 EHGFAALLADGSVYAWGEGELTEYHVAFPARLSTTNRTNKVIDIYANRGAFAALTISRQL 355
+ GFAAL DG+V WG + + NR + ++AN+ A AAL + ++
Sbjct: 117 KDGFAALRQDGTVVYWGNAG------KYSLDKALQNRMTNITKLFANQEAIAALDANGKV 170
Query: 356 YVWGSKFNGADTSVLQNKLQDVQKVYPFEEGFVALRRDNTAIAW-EGWELVGKQPRYQEV 414
+ WG G ++ +Q++L DV ++ FVAL+++ +A+ W + E + ++
Sbjct: 171 HTWGYGPYGGNSLHVQDQLVDVVDIFARGRSFVALKKEGSAVIWGQVEESTNMKKLLPQL 230
Query: 415 TQVNKVVTYEREFAFLKQDGTVV 437
T V K+ ++ +A LK+DGTVV
Sbjct: 231 TDVAKIEYFQHTYAALKKDGTVV 253
Score = 84.0 bits (206), Expect = 1e-20
Identities = 51/184 (27%), Positives = 83/184 (45%), Gaps = 9/184 (4%)
Query: 339 IYANRGAFAALTISRQLYVWGSKFNGADTSVLQNKLQDVQKVYPFEEGFVALRRDNTAIA 398
+ N AFAALT S ++ WG + G D+ + +L+ V+++ P ++GF ALR+D T +
Sbjct: 72 VVTNSSAFAALTQSGEVITWGDSYAGGDSREVTEQLKQVKQIVPVKDGFAALRQDGTVVY 131
Query: 399 WEGWELVGKQPRYQE-VTQVNKVVTYEREFAFLKQDGTVVDGHSGP--------KTKITQ 449
W Q +T + K+ + A L +G V GP + ++
Sbjct: 132 WGNAGKYSLDKALQNRMTNITKLFANQEAIAALDANGKVHTWGYGPYGGNSLHVQDQLVD 191
Query: 450 ATDIFPTGLGFTAKRQDGSVAVWMGDNAAVTLDKQAVDLSQMRDIRSNLLDAIALMADGT 509
DIF G F A +++GS +W + + K L+ + I AL DGT
Sbjct: 192 VVDIFARGRSFVALKKEGSAVIWGQVEESTNMKKLLPQLTDVAKIEYFQHTYAALKKDGT 251
Query: 510 VQTW 513
V +W
Sbjct: 252 VVSW 255
Score = 48.9 bits (115), Expect = 4e-10
Identities = 51/215 (23%), Positives = 90/215 (41%), Gaps = 20/215 (9%)
Query: 66 QVTDESHKIPMPAHLAQVSQIYSNLSAFAALKQDGTVVAWGDPDCGGDINNAAEPLVNVK 125
QV + ++ + L V++I +AALK+DGTVV+WG I +A + +V++
Sbjct: 216 QVEESTNMKKLLPQLTDVAKIEYFQHTYAALKKDGTVVSWGWRSDAYSIRSALKDVVSM- 274
Query: 126 QLYAAENTCGFAALTRDDKLIPWGMGM--------KQVLTGVRSFVLAEGLYAAIKQDGS 177
N C FA L+ WG G+ K +TGV+ + + ++
Sbjct: 275 ----TANNCAFAILSPTGDAHFWGDGINCGVDWIKKTDITGVKEIISIGSGFLLLRD--K 328
Query: 178 VVSWSNLDSTPAELSSGQYAAPAMTN---IDTVLINKG--AFAALKQGGAVVTWGDAAYG 232
V D T G + A + + + +I +G +F + G VV G A
Sbjct: 329 AVPQIVADDTDYAYMFGFHDAQEILDKYWQEGSVITRGPASFVFTRPDGKVVPVGYRANR 388
Query: 233 GDSRHVASELNHVDLLYANNNAFTARTATGKLVSW 267
+ + + + + L N+ + + G+LVSW
Sbjct: 389 DNVEKLMARIPRLTWLNGANDGYVGISEKGELVSW 423