Pairwise Alignments

Query, 399 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 414 a.a., DUF418 domain-containing protein from Brevundimonas sp. GW460-12-10-14-LB2

 Score =  114 bits (286), Expect = 4e-30
 Identities = 108/404 (26%), Positives = 179/404 (44%), Gaps = 51/404 (12%)

Query: 17  PIPST-RNANLDAIRGLAVLGIFFMNIYFMGISFYGYAPHQI---PLLWDQILQTFS-NF 71
           P+ +T R A+LD +RGLAVLGI  +N+   G+    Y    +   P+     +  ++ + 
Sbjct: 16  PVAATSRIASLDVMRGLAVLGILAVNVVSFGLPVMVYQDASLSPFPVTGANAVARWTMDV 75

Query: 72  FIEGRFISLFSMLFGVGLYIQYQKFTAKGLAAYPLLRSRLKWLIIFGLIHGILIWSGDIL 131
           F   +FI+LFSMLFG  +Y+   +      A   LLR RL WL +  LIHG+  W GD+L
Sbjct: 76  FFHQKFITLFSMLFGASIYLVGGE--RDDAARGKLLRRRLFWLAVIALIHGLAFWYGDVL 133

Query: 132 LTYGISGFLALCYRDITIAEQKRKANIFIFMSLVITCLL--------------------A 171
           L Y  SG   +  R +       +A   I + L +T LL                    A
Sbjct: 134 LLYAWSGLFVMLMRSM-------RAGTLIGIGLGVTLLLGAMQAGATWLMVAGPPAITEA 186

Query: 172 LSGSDELFT--RESAFFAEQYSAWTSSYPNQLLLHLIQVGYTALALPFTLMWFTAGLMLL 229
           ++     +T    +   A   S WT +    L   L+  G +     F+    T  LM+L
Sbjct: 187 MNQGGPHYTAGMVTESIAAYRSGWTGAMGQNLQNWLLLQGASLTMFVFS----TVALMML 242

Query: 230 GMALYRQGIFEQGFNRNTLLKL------ALASL-VLSTMDTLLGLTQNPMLVMFSDIIVM 282
           G+ L++ G+F         + L       LA L VL   + +     +P   +    +V 
Sbjct: 243 GLGLFKAGVFSGRAPNGVYVALIAVGGAVLALLGVLEWREAMAPAGTHPTRGLAE--VVA 300

Query: 283 LSAIPMALIYIHILV-SICQNRSTVLKPLQNVGKLAFSLYILQSIVGVLVF-RHLAPELL 340
              + + L Y+ ++V +  +  + +   L+ VG++AF+ Y+ Q+++   +F     P L 
Sbjct: 301 SFPVFVTLAYVSLIVLATTRGLAWITAALRPVGQMAFTNYLTQTLIMTSIFYMPWGPRLF 360

Query: 341 LSLDRWGYMAIALVYSVVQLLLASLYLRYFKQGPLEKLWRHLAF 384
              D      + +    +QL+ + L+L  F  GPLE +WR L +
Sbjct: 361 GRADYVQMWGLVVAVWALQLIWSPLWLSRFSMGPLEWVWRCLTY 404