Pairwise Alignments

Query, 325 a.a., iron-sulfur cluster-binding protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 368 a.a., Phenylacetate-CoA oxygenase/reductase, PaaK subunit from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  132 bits (331), Expect = 2e-35
 Identities = 90/330 (27%), Positives = 158/330 (47%), Gaps = 20/330 (6%)

Query: 3   FDYKPGQFITFVLEINGEQACRSYTLSSTPS---RPYSLMVTIKRVDGGLVSNYLIDHLQ 59
           F ++PGQF+T    I+G+   RSY++SS  S   +   L + I+ VDGG+ SN+    L+
Sbjct: 37  FAFEPGQFLTVRATIDGQDVRRSYSISSPRSLLTQRGELTLGIRPVDGGVFSNWAATQLK 96

Query: 60  PGQTVRVLPPTGQFNLFDIPANKYLFLSAGCGITPMYSMSRYLTDTQINADIAVVHSART 119
            G T+R +PP G+F +    A   +  +AG GITP+ S+     +    +   +V+  R 
Sbjct: 97  AGDTLRAMPPDGRFTIHKPRAVHRVGFAAGSGITPILSLIASTLEESPTSKFTLVYGNRR 156

Query: 120 QADIIFKNTLETMAARHAS-FKLCYLVEGVTTDTVWHTEEAFHYVGRLSAQNLLSLV--- 175
              ++F   L+ +  R+A    L +++           +E     GR+ A  + +L+   
Sbjct: 157 MGSVMFNEALQDLKDRYADRLTLIHILSR-------QAQEVPLLEGRIDADKVRALIDTL 209

Query: 176 -PDFAERIVFLCGPELYMQAVKTILTELNFDMNKLYHESFATAVKEAQSHVKQAEIQSET 234
            P  +   VF+CGPE  ++A +  L +     ++++ E F +   EA    ++       
Sbjct: 210 LPVGSMDEVFICGPEAMIEATEKALLDAGVRPDRVHTERFTSPTLEALPAAQRRAAVLGQ 269

Query: 235 PTTSSTG---FMLSIGDKKHLL--TAEQTLLDGIEAEGLPIIAACRSGVCGACKCKVLQG 289
           P   + G     + +  K H L    ++ +LD     GL +  +CR GVC  C+ KV++G
Sbjct: 270 PAVRAEGEVELTVVLDGKPHPLRMNRDERVLDVALNAGLDLPWSCRGGVCCTCRAKVMEG 329

Query: 290 ETESTSYMTLTPTDIEAGYVLACSTRLKSD 319
             +     TL P + + G+VL+C  R  +D
Sbjct: 330 AVQMDKNFTLEPWETDKGFVLSCQARPTTD 359