Pairwise Alignments

Query, 325 a.a., iron-sulfur cluster-binding protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 322 a.a., NADH oxidoreductase HCR from Escherichia coli HS(pFamp)R (ATCC 700891)

 Score =  167 bits (424), Expect = 2e-46
 Identities = 109/321 (33%), Positives = 165/321 (51%), Gaps = 33/321 (10%)

Query: 3   FDYKPGQFITFVLEINGEQACRSYTLSSTPSRPYSLMVTIKRVDGGLVSNYLIDHLQPGQ 62
           + Y+ GQ+   V   N  +  R+YT+SSTP     + +T++R+D G+ S +L   ++ G 
Sbjct: 35  YPYRAGQY-ALVSVRNSAETLRAYTISSTPGVSEYITLTVRRIDDGVGSQWLTRDVKRGD 93

Query: 63  TVRVLPPTGQFNLFDIPANKYLFLSAGCGITPMYSMSRYLTDTQINADIAVVHSARTQAD 122
            + +    G+F   D   +K+L L+AGCG+TP+ SM R+L      AD+ V+++ RT  D
Sbjct: 94  YLWLSDAMGEFTCDDKAEDKFLLLAAGCGVTPIMSMRRWLAKNCPQADVQVIYNVRTPQD 153

Query: 123 IIFKNTLETMAARHASFKLCYLVEGVTTDTVWHTEEAFHYVGRLSAQNLLSLVPDFAERI 182
           +IF       A    ++ +  + E   T       E F   GRL+ + LL+ VPD A R 
Sbjct: 154 VIF-------ADEWRNYPVTLVAENNVT-------EGF-IAGRLT-RELLAGVPDLASRT 197

Query: 183 VFLCGPELYMQAVKTILTELNFDMNKLYHESFATAVKEAQSHVKQAEIQSETPTTSSTGF 242
           V  CGP  YM  V+  +  L   + + + E F T V EA               TS   F
Sbjct: 198 VMTCGPAPYMDWVEQEVKALG--VTRFFKEKFFTPVAEA--------------ATSGLKF 241

Query: 243 MLSIGDKKHLLTAEQTLLDGIEAEGLPIIAACRSGVCGACKCKVLQGETESTSYMTLTPT 302
                 ++       TLL+ +E+  +P++AACR+GVCG CK KV+ GE   +S MTLT  
Sbjct: 242 TKLQPAREFYAPVGTTLLEALESNNVPVVAACRAGVCGCCKTKVVSGEYTVSSTMTLTDA 301

Query: 303 DIEAGYVLACSTRLKSDVTLS 323
           +I  GYVLACS   + D+ L+
Sbjct: 302 EIAEGYVLACSCHPQGDLVLA 322