Pairwise Alignments

Query, 177 a.a., 16S rRNA processing protein RimM (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 176 a.a., 16S rRNA processing protein RimM from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 43.5 bits (101), Expect = 2e-09
 Identities = 36/160 (22%), Positives = 71/160 (44%), Gaps = 8/160 (5%)

Query: 11  LGKLGSCHGIKGWLKITAYTDSVEGIFDYSPWLIKENGEWREVKVIQWRYQ-GKAVVAEL 69
           LG +   HG++G +      D  E   D     +++N       +  +  Q     +A+ 
Sbjct: 9   LGYIAKVHGLQGEVVAVLDVDYPENYEDIEHVFLEKNNRLAPYFLEHFVSQPNNRFLAKF 68

Query: 70  EGVTTRERAQMLTNCEIGILPQQMNALPEDEFYWRDLIGCEVINTTGYNMGIVDQIVETG 129
           EG   +  A  L    + +  + + AL +D++Y+ +L+G EV + +   +G V +I +  
Sbjct: 69  EGYDDKNAADTLVGTALYLPLKDLPALEDDQYYYHELVGFEVEDASKGVLGSVKEIYDLQ 128

Query: 130 SNDVLLVKANAKDSFGKVERMVPFVPGQFILKVDVQGKQI 169
           +  +L +    K      E ++P +    ILKVD   K++
Sbjct: 129 TQYLLGLDYQGK------EILIP-IQDDIILKVDKAAKKV 161