Pairwise Alignments

Query, 177 a.a., 16S rRNA processing protein RimM (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 182 a.a., ribosome maturation factor from Escherichia coli BL21

 Score =  197 bits (500), Expect = 1e-55
 Identities = 84/170 (49%), Positives = 127/170 (74%)

Query: 8   PVVLGKLGSCHGIKGWLKITAYTDSVEGIFDYSPWLIKENGEWREVKVIQWRYQGKAVVA 67
           P+VLGK+GS +GI+GWL++ + T+  E IFDY PW I++ G+W++V++  W++  + ++ 
Sbjct: 13  PIVLGKMGSSYGIRGWLRVFSSTEDAESIFDYQPWFIQKAGQWQQVQLESWKHHNQDMII 72

Query: 68  ELEGVTTRERAQMLTNCEIGILPQQMNALPEDEFYWRDLIGCEVINTTGYNMGIVDQIVE 127
           +L+GV  R+ A +LTNCEI +   Q+  L E ++YW+DL+GC+V+ T GY++G V  ++E
Sbjct: 73  KLKGVDDRDAANLLTNCEIVVDSSQLPQLEEGDYYWKDLMGCQVVTTEGYDLGKVVDMME 132

Query: 128 TGSNDVLLVKANAKDSFGKVERMVPFVPGQFILKVDVQGKQILVDWDPDF 177
           TGSNDVL++KAN KD+FG  ER+VPF+ GQ I KVD+  + I VDWDP F
Sbjct: 133 TGSNDVLVIKANLKDAFGIKERLVPFLDGQVIKKVDLTTRSIEVDWDPGF 182